Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01007 ATGGTCCCTCAAAAGACTTCGGGATCGGAAAACCTCTTTGGCAGAGGAAAATTTGGCAGAGTCTACATTGCGAGAGAAAGCAAATATGTAGTTGCATTGAAGATTATATTCAAGGAACAACTTGAGAAGTACAGACTTCACCATCAGGTAGGGAGGGAGATGGAAATACAGTCCAACCTTCACCACCCAAACATTCTACGACTATACGGCTGGTTTCATGATGCCGAGCGTGTTTTCTTGATTCTTGAATATGCCCATAATGGTGAGCTCTACAAGGAGCTTAGAAAAAGAGGCCACCTCACTGAGATGCAAGCAGCCACGAGATGTGAGAGCCATTTCATCGTCAGCAGATGGATCATGCATCTATACTGCAGATGGAAAGATTAG 387 0.4419 MVPQKTSGSENLFGRGKFGRVYIARESKYVVALKIIFKEQLEKYRLHHQVGREMEIQSNLHHPNILRLYGWFHDAERVFLILEYAHNGELYKELRKRGHLTEMQAATRCESHFIVSRWIMHLYCRWKD 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01007 128 SMART serkin_6 7 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01007 128 Gene3D Phosphorylase Kinase; domain 1 9 88 - -
Aip01g01007 128 Pfam Protein kinase domain 12 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01007 128 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 14 107 IPR030616 GO:0004672
Aip01g01007 128 ProSiteProfiles Protein kinase domain profile. 7 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01007 128 SUPERFAMILY Protein kinase-like (PK-like) 11 106 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01007 Aip-Chr1 20542616 20543966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01007 13 107 EF-hand Containing Proteins AT1G74740 39.796 8.59e-15 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Aip01g01007 Pkinase 3.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01007 K08850 - aip:110270155 170.629