Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01004 ATGCAAGAGTCAAGTGCGACGTCTCTGAAAATCTCACTCTTAAAGCCAATGCTCGGAGGAGTCTCAATGCACAACATAAACAGTCGTCTTAACATGATGAACAAAAACAGAGAGATATCCCTTTGTGGACTGAAAATGAGGGCTGTTCAGCTTTCAACAGATCACAGCACAAGTATTGAAGAGGAAGTGTTTAGAATAAGAGTAGAACACCCAGATGATAATCAAGCCATATTGAATGATAGAGTGAAAGGACAATTAAAAGTCACCAGAGCATTTGGTGCCAGATTCCTGAAGAGGATTTTCACTAGCAACACTTTCAGGCTGCTCTCAAGGCTGGCAAACAAACACAAGATGGGAGAGATGAGGAAATCACAGCCCTTCGTGTGGAAATTCAGgtattttctggctgaaattgagggacttgagcagaaatcagattcagagTTGAGCATAGGAAGTTTTGCTTGCAAATGTAAAGGCTGCAATCATTGGAGGAGGATTGATGGGCTCTGGAATTCAAACAGCAAAAGGTTTGCTTATACTTTAATTTGCACTGGTGTTTTCATGTGTGTGGTAACATGTCTAGGACATATGGCAGCAGGTTATTGTAGGAGAGATCAAGCACTCCCAAGCTGCTCATGTCACCAACTTGTGGAGGGACTTTTCCAGTGA 672 0.3929 MQESSATSLKISLLKPMLGGVSMHNINSRLNMMNKNREISLCGLKMRAVQLSTDHSTSIEEEVFRIRVEHPDDNQAILNDRVKGQLKVTRAFGARFLKRIFTSNTFRLLSRLANKHKMGEMRKSQPFVWKFRYFLAEIEGLEQKSDSELSIGSFACKCKGCNHWRRIDGLWNSNSKRFAYTLICTGVFMCVVTCLGHMAAGYCRRDQALPSCSCHQLVEGLFQ 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01004 223 Gene3D - 28 137 IPR036457 -
Aip01g01004 223 Pfam Protein phosphatase 2C 41 102 IPR001932 -
Aip01g01004 223 PANTHER PROTEIN PHOSPHATASE 2C 27 100 IPR015655 GO:0004722|GO:0006470
Aip01g01004 223 SUPERFAMILY PP2C-like 47 98 IPR036457 -
Aip01g01004 223 PANTHER PROTEIN PHOSPHATASE 2C 32 27 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01004 Aip-Chr1 20437351 20445804 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01004 23 99 PP2C-type Phosphatase Gene Family AT2G46920 66.234 5.36e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01004 - - ahf:112721125 195.667