Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01001 ATGGCTTCAAGATTAGGTAGTGATGATGATGCTGATAATAACAAAGGTAGCATGTGGGCTTTGGAGCAAAAGCTGGATCAGCTAATGGATGAAGAAGCTGCAAGGCTAAAAAATATGTACAGAGAAAAAAGAGAAACTGAAAAAGATTTTGATGACATGGATAAGCGCTTGAAGGATATAGAAGATGAAACTGCTGCTCTTAAAGAGATGCAAGCCAAGGTCAAGAAGGAGATGGGATCTGTCCAGGATCTTGAAACTGCATCTACTAGTCAGGTCAACAGAGAGGAGATAGATTCTCGTTCAATTTTTGTAGGCAATGTCCTGCCTATTGGAAAAGAGTTATTGGCTTGTCTTGCAGCTTTCAAAGAATTGGCTTCTTGTACTCAAGGTCAAATAGCAATTCGAGCTTCTCTTTCTAGCATCCACTCTCAAGCTCATGAACTTGAATCGCACAATGATGATAATGTTGTGAATTATAATTATCAGTGTCACAGAATGGAAAAAATGCCCCCCATTACTAAGCTGTTGGATGAAGTTGTTGAGATCAAATAA 552 0.3895 MASRLGSDDDADNNKGSMWALEQKLDQLMDEEAARLKNMYREKRETEKDFDDMDKRLKDIEDETAALKEMQAKVKKEMGSVQDLETASTSQVNREEIDSRSIFVGNVLPIGKELLACLAAFKELASCTQGQIAIRASLSSIHSQAHELESHNDDNVVNYNYQCHRMEKMPPITKLLDEVVEIK 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01001 183 Coils Coil 29 87 - -
Aip01g01001 183 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 32 107 - -
Aip01g01001 183 PANTHER POLYADENYLATE-BINDING PROTEIN 1-LIKE 32 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01001 Aip-Chr1 20328875 20331804 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01001 8 44 Inorganic Solute Cotransporters AT2G35060 64.865 1.31e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01001 K14396 - ahf:112784635 102.449