Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00989 ATGCATTACCTCCACTCACTCTTGCTCCTCCTCATTTTGGTGCTAACCGCCGATGCCAGTCCCTCAACGGAAGTAAACACAATGCTACCATCCGACGCCGTTTCACTGCTTTCCTTCAAGTCAAAAGCAGACCTCGACAACAGGCTACTGTACGCCTTAAACGAGCGCTACGACTACTGCGAGTGGCAAGGAGTGAAGTGCGCACAAGGCAGAGTGGTTCGCTTCGTCGTCCAAGGCTTCTCTCTCAGGGGCACCTTCGCCGCCGACACACTCGCCCGCCTCGACCAGCTCCGCGTCCTCAGCCTCCGTAACAACTCACTCTCCGGCACCATCCCTGACCTCTCCCCTCTTAAAAACCTCAAGTCCCTCTTCCTCGACCGTAACCGATTTTCCGGAACGTTCCCGCGCTCGGTTCTCACGCTTCATCGGTTAGTTACTCTCTCACTCGCGCATAACGAGCTTGCCGGTCCGATTCCGGTTCGGCTCAACTCGCTCGACCGGTTAATCTCCCTCCGGCTGGATTCTAACTACTTTAACGGCACTCTCCCTGCTCTGAATTTGTCGTTTCTTGAAACGCTTGATGTTTCGAATAACAACCTTACCGGTCCCGTGCCTGTTACGCCCACGCTCGCGAAGTTCGATGCACCGTCGTTTTCAGGAAACAATGACCTCTGCGGAGAGATTATCCACAAGCCATGCGATCGGCATTCTAGATTCTTCGGTGGCGGTGGCTCTTCTGCTGCCACGTCCTCCGCCGCGCCGCTAGGGCAGAGCGAGCAGGGGATCGTGGTGGTTCATTCGCCGATCAAGGAAAGGAAGCACAAGAGCAGTGGATTGGTTCTCGGAATCTCCGTCGCGGCCGCGGTTCTCGTCGGCGCAGGGCTTGCCGTGGTTGCGGTGGCGAGGAAGAAGAATAGAAACAAGCAAGGGGGAATGCTCGGGGAAAAATTTGAGACGGAGAAAACGACGGCGTTGGAGGTTGAAACAGGAAGAAATAACCCTGCGCAGTTGGTGAGGGAAAGGGAAAACGAAAACGACGTCCTTTCAATGATGAAGGTGAAGAGGATAGAGGAGATAGAGAGGGCGCATAAGAGTGGGAAGTTGATATTCTGCTACGGTGAAGTGCAGCCGTACACGCTGGAGCAGCTGATGAGGGCGTCGGCAGAGCTTCTTGGGAGGGGGAGCGTGGGGACCACCTACAAGGCGGTTCTTGATTCGCGGCTGATCCTGACAGTTAAGAGAATGGACGCCGGGAAGACGGCAGCGATGAGCGGAGAGGTGTTTGAGAGGCACATGGAGATGGTTGGTGCTCTTCGGCACCCGAATTTGGTTCCGGTGAGGGCTTATTTTCAGTCCAAGGGCGAGAGGCTTGTCATCTATGATTATCAGCCAAATGGAAGCCTTTTCAATCTTGTTCATGGCTCAAGATCAGCAAGGGCAAAGCCCCTCCATTGGACATCATGCTTGAAAATAGCAGAAGATGTAGTTCATGGACTTGCTTATGTACATCAAGCTTCATCCTTAATTCATGGCAACCTAAAATCCTCGAATGTCCTTCTTGGAGCAGACTTTGAAGCGTGCATTACAGACTACGGCTTGTCCTTTCTGGCAGATTCTTCGGTCGCTGAAGATGCCGATTCCACAGCCTATAAAGCACCAGAAGTCCGCCAGTCTAGCCGCAGAGCATCTTCCAAGTCTGATGTCTATTCTTTCGGCGTGCTTCTGCTGGAGCTTTTGACCGGTAAACACCCCTCTCAACACCCTGTGCTTGTGCCAACGGATTTGCAAGACTGGGTTAGAGCAATGAGGGACGACGATGATAGCGAAGACAACCGGCTCGAAATGCTCACAGAGGTTGCCAGTATTTGCAGTGCTACCTCACCAGAGCAGAGACCGGCAATGTGGCAAGTCTTGAAGATGATACAGGAAATAAAGGAGAGCGCAACATGA 1950 0.5323 MHYLHSLLLLLILVLTADASPSTEVNTMLPSDAVSLLSFKSKADLDNRLLYALNERYDYCEWQGVKCAQGRVVRFVVQGFSLRGTFAADTLARLDQLRVLSLRNNSLSGTIPDLSPLKNLKSLFLDRNRFSGTFPRSVLTLHRLVTLSLAHNELAGPIPVRLNSLDRLISLRLDSNYFNGTLPALNLSFLETLDVSNNNLTGPVPVTPTLAKFDAPSFSGNNDLCGEIIHKPCDRHSRFFGGGGSSAATSSAAPLGQSEQGIVVVHSPIKERKHKSSGLVLGISVAAAVLVGAGLAVVAVARKKNRNKQGGMLGEKFETEKTTALEVETGRNNPAQLVRERENENDVLSMMKVKRIEEIERAHKSGKLIFCYGEVQPYTLEQLMRASAELLGRGSVGTTYKAVLDSRLILTVKRMDAGKTAAMSGEVFERHMEMVGALRHPNLVPVRAYFQSKGERLVIYDYQPNGSLFNLVHGSRSARAKPLHWTSCLKIAEDVVHGLAYVHQASSLIHGNLKSSNVLLGADFEACITDYGLSFLADSSVAEDADSTAYKAPEVRQSSRRASSKSDVYSFGVLLLELLTGKHPSQHPVLVPTDLQDWVRAMRDDDDSEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQEIKESAT 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00989 649 Gene3D Transferase(Phosphotransferase) domain 1 464 649 - -
Aip01g00989 649 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 648 - -
Aip01g00989 649 Gene3D Phosphorylase Kinase; domain 1 349 462 - -
Aip01g00989 649 Pfam Protein kinase domain 388 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00989 649 SUPERFAMILY Protein kinase-like (PK-like) 389 644 IPR011009 -
Aip01g00989 649 SUPERFAMILY L domain-like 29 226 - -
Aip01g00989 649 Gene3D Ribonuclease Inhibitor 30 184 IPR032675 -
Aip01g00989 649 ProSiteProfiles Protein kinase domain profile. 385 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00989 649 ProSiteProfiles Leucine-rich repeat profile. 96 118 IPR001611 GO:0005515
Aip01g00989 649 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 5 648 - -
Aip01g00989 649 Gene3D Ribonuclease Inhibitor 185 233 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00989 Aip-Chr1 19729665 19735353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00989 14 648 Receptor kinase-like Gene Family AT3G50230 54.058 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip01g00989 Pkinase 3.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00989 - - gmx:100783086 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00989 01 19729665 19735353 Aip01g00989 01 19729665 19735353 ECH