Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00988 ATGGAGACATCGGAGAATTGTTCTGTGAAAGTTGCTCTTCACATTCGTCCGCTCATTGCTGATGAACGACAGCAAGGTTGCAGAGAATGCGTTTCAGTTACGCCTGCGAAGCCTCAGGTCCAAATTGGGTCACATTTCTTTACATTTGATCATGTTTACGGAAATGGTGGGTCTCCTTTGGCTGATATGTTCGAAGAATGCATTGCCCCGTTAGTTGATGGCTTATTCCAAGGATATAATGCTACTGTACTTGCGTATGGCCAGACAGGATCTGGGAAAACATATACAATGGGAACTGGCTATAGTGACAATTGTCAGACACAGGCTGGATTAATTCCTAAGGTTATGAATGCCTTGTTCAGCAAGATTGAAACACTAAAGCATCAGACAGAATTTCAGTTGCATGTGTCCTACATTGAGATTTTGAAGGAAGAGGTGAGGGACTTGTTAGATTCTATATCTAACAGTAAATTGGAATCTGCTAATGGCAATTCTGGAAAAGCAACTGTTCCTGGGAGAACACCGATACAAATTCGTGAAACCTCAAGTGGAGTCATAACACTGGCAGGATCAACTGAAGTTGCTGTGAGTACACTACAGGAGATGTCTACTTGCTTGGAGCAGGGTTCTTTAAGTAGGGCAACAGGAAGTACAAATATGAACAACCAGTCCAGTCGGTCACATGCCATCTTCACAATCACACTAGAACAGATGCGCAAGCTCCATTCAATTTCTCCCGACAATGACTCTTCAGACGAGGATATGGGTGAAGAATACCTTTCTGCAAAGCTCCATTTGGTAGATCTAGCTGGATCTGAGCGAGCTAAAAGAACTGGTTCTGATGGTGTTCGTTTAAAAGAAGGCATACACATCAATAAAGGTCTCCTTGCACTTGGAAATGTCATAAGCGCATTGGGAGATGAGAAAAAGCGAAAGGAGGGTATGCATGTCCCGTATCGGGATAGCAAACTCACTCGACTTTTGCAGGATTCACTTGGTGGAAACAGCAAAACTGTCATGATAGCTTGCATTAGTCCTGCCGACATCAATGCTGAGGAAAGTCTCAATACTCTCAAATATGCAAATCGTGCTCGCAATATTCAAAATAAGCCTATTGCTAATCGAGATTTGATATCCAATGAGATGCAGCAAATGCGTCAACAGTTAAAGTACTTGCAGGCTGAACTTTGTGCTCGGGGAGGAACTCCAGCTGATGAAGTGCGGGTTCTCAAGGAAAGGATTGTGTGGCTTGAGGCGACTAATGAGGGCCTCTCTCATGAACTTCATGAATATCGCAGTAGATGTGCTTTTGTAGACAAATGTGAAATTGATGAACCAGATGGTCATATTTATCTTGAAAGACACTTTCAGAGCTCTGTTTCATCTGATCATCCCATGATTGAAAGTATATCTGGTGACGATTCAGGTGAAAGTGATGAAGCAGTAAAGGAATTGGAGCATGCACTTTTGCAGAATACCATGGATAAAGAGATGAATGAGTTAAATAAGCGCTTAGAGCAGAAAGAGTCTGAGATGAAGCGCATTGGAATTGATACTGAAGCACTCAAAGAGCACTTTGGGAAAAAAATTATGGAGCTTGAAGAGGAAAAAAGAAAAGTGCAGAAATCTCAAGATGTTCGTGGCCAAAAATTGAAAGCACTGGAAGCACAGATTTTAGACCTCAAGAAGAAACAAGAAAACCAGGTGCAGCTACTAAAGCAAAAGGAGAAGAGCGAAGAAACTGCAAAAAAATTGCAAGCTGAAATACAGTACATCAAGGCTCAAAAGGTCCAATTGCAGCATAAAATGAAGCAAGAGGCAGAACAATTTCGACAATGGAAGGCTTCTCGAGAAAAGGAGTTACTTCAGTTGAAAAAGGAGGGGAGAAGGAATGAGTATGAAAGACATAAACTTGAGGCTCTAAACCAGCGCCAAAAAAAGGTGCTTCATAGGAAGACAGAGGAAGCAACAATAGCCACAAAAAGGCTAAAGGAATTATTGGAAGCCCGCAAATCTTCTCCACGTGAAAACTCTGCTTATTCAAATGGACACCTTCAACCTGGGCTGGTTAATGAGAAATCCCTCCAAAAATGGCTTGATCAGGAGCTTGAGGTCGTGGTACATGTGCATGAAGTTCGTGCTGAATTCGAAAAGCAAAAGCAGGTCCAAGCTGCATTGGAGGAAGAGTTGGCTACACTGAAACAAGTCCATCAGTTCTCGGATTGCCAGAGTATCCCTACAGGACAGAACAAATATTCCAGATTATTATCCATGCCACCGGATGTAAAAGTCTCAAGAATAGCTTCTCTTGAGAATATGCTGGGCATGTCTTCGGCTGCTTTGAAAGCCATGGCTTTACAACTTACAGAGGCTGAAGCAAGGGAACGTGCATTAAGTAACCGTGGACGTTGGAACCAGTTACGCTCAATGGGAGATGCTAAGAATGTGCTTCAGTACTTATTCAATGCTACAGCAGAAGCAAGGTGTCAATTGTGGGAAAAGAATATAGAACTTCAGGACTTGAAAGAGCAAATAAACGAACTAGCAAGGCTACAGAAAGAAAGTGAAACACAGAGAAAAGAACTTCTAAAGGAGCAAACACTTAAGGAAGAAGCTGTTTCTGTCGCCTTGAACACATCAATGGAAAACTCTCGGTCCTTGAAACACCTTGCGGATGAATTGAGTGGCCCATTGTCTCCCATGTCACTTCCCGCAACAAAGCAACTTAAATTCACCCCTGGAGTTGTTAATGGGTCAGTTACAGAGTCAGCTACTATTATGGACAATGGAAGAAAGATGATACCCATTGCGGAGTTGTCAGCAAGGAGGCTAGCAGCTGTTGGGCAAGCTGGAAAACTTTGGAGGTGGAAGAGAAGTCATCATCAATGGCTGATACAGTTTAAATGGAAATGGCAGAAACCGTGGAAACTTTCAGAATGGATCAAACACAGCGACGAAACAATCATGAGGTCAAGGCCTCGAGCACAGGCCTTGATCAATGCTATGTGA 3009 0.4271 METSENCSVKVALHIRPLIADERQQGCRECVSVTPAKPQVQIGSHFFTFDHVYGNGGSPLADMFEECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGYSDNCQTQAGLIPKVMNALFSKIETLKHQTEFQLHVSYIEILKEEVRDLLDSISNSKLESANGNSGKATVPGRTPIQIRETSSGVITLAGSTEVAVSTLQEMSTCLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSISPDNDSSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGVRLKEGIHINKGLLALGNVISALGDEKKRKEGMHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPIANRDLISNEMQQMRQQLKYLQAELCARGGTPADEVRVLKERIVWLEATNEGLSHELHEYRSRCAFVDKCEIDEPDGHIYLERHFQSSVSSDHPMIESISGDDSGESDEAVKELEHALLQNTMDKEMNELNKRLEQKESEMKRIGIDTEALKEHFGKKIMELEEEKRKVQKSQDVRGQKLKALEAQILDLKKKQENQVQLLKQKEKSEETAKKLQAEIQYIKAQKVQLQHKMKQEAEQFRQWKASREKELLQLKKEGRRNEYERHKLEALNQRQKKVLHRKTEEATIATKRLKELLEARKSSPRENSAYSNGHLQPGLVNEKSLQKWLDQELEVVVHVHEVRAEFEKQKQVQAALEEELATLKQVHQFSDCQSIPTGQNKYSRLLSMPPDVKVSRIASLENMLGMSSAALKAMALQLTEAEARERALSNRGRWNQLRSMGDAKNVLQYLFNATAEARCQLWEKNIELQDLKEQINELARLQKESETQRKELLKEQTLKEEAVSVALNTSMENSRSLKHLADELSGPLSPMSLPATKQLKFTPGVVNGSVTESATIMDNGRKMIPIAELSARRLAAVGQAGKLWRWKRSHHQWLIQFKWKWQKPWKLSEWIKHSDETIMRSRPRAQALINAM 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00988 1002 Coils Coil 491 518 - -
Aip01g00988 1002 Coils Coil 375 395 - -
Aip01g00988 1002 Coils Coil 781 801 - -
Aip01g00988 1002 CDD KISc_KIF4 7 368 - -
Aip01g00988 1002 Coils Coil 649 669 - -
Aip01g00988 1002 Pfam Kinesin motor domain 15 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00988 1002 Coils Coil 551 602 - -
Aip01g00988 1002 Gene3D Kinesin motor domain 1 395 IPR036961 -
Aip01g00988 1002 Coils Coil 139 159 - -
Aip01g00988 1002 Coils Coil 831 868 - -
Aip01g00988 1002 PRINTS Kinesin heavy chain signature 263 281 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00988 1002 PRINTS Kinesin heavy chain signature 317 338 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00988 1002 PRINTS Kinesin heavy chain signature 218 235 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00988 1002 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00988 1002 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 398 IPR027417 -
Aip01g00988 1002 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 545 - -
Aip01g00988 1002 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 540 1001 - -
Aip01g00988 1002 ProSitePatterns Kinesin motor domain signature. 262 273 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aip01g00988 1002 Coils Coil 709 736 - -
Aip01g00988 1002 SMART kinesin_4 6 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00988 1002 Coils Coil 523 543 - -
Aip01g00988 1002 ProSiteProfiles Kinesin motor domain profile. 8 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip01g00988 1002 PANTHER KINESIN-LIKE PROTEIN KIN-4B 1 545 - -
Aip01g00988 1002 PANTHER KINESIN-LIKE PROTEIN KIN-4B 540 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00988 Aip-Chr1 19718272 19729418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00988 49 413 Calmodulin-binding Proteins AT5G65930 36.164 8.76e-54 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00988 - - gmx:100790341 1620.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00988 01 19718272 19729418 Aip01g00988 01 19718272 19729418 ECH