Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00984 ATGTGGACGGTATTTCTAGACCAAGAGGCACAGCCATTAGAGGCAGGGGTGAAGGAAGAGGTCGAGGCAAGAGAGGTACATCAAGCGGAACCAGAAATGGAATCTCGAGCCGGAGCACGTCTGCCCATTACCGCCCATAGAGGACATCTGATGAACTATCGATTAGGGTTCGTAACGGTGCCAGACTCCATCAACGCAAACTCTCTTCCACAGAAGCATCTGCCGTCCAGCTTCTTCACCTTCTTCTTCTTCGAACTTGAAGAAGAACTACCACTACCATCACTTGGAGCAGGGGTAAATCTGCGGAAAGACATTGCGGGAGCTGAAGGGGAGAGAAAGAGATCAGAGAGAAAAAAAGAATGTGGGATCTCAATGACTCACCCGATCGGAGGAGAAAGCTCCTCCGCAGTTGTCATCGAAGACGGATCAGAAGAAGAAGAACAACAACAAGAAGAAGGTAGCGTCGTAAGAGCAACAACGGACATGAAGAAGAGTAGAAGAAGCAAGATATTCGGGTTCTCAGTAACCCACGGTGATGATGATGAAGAAGATGAAGATGAAGATTCCATGGATAGCGAGAACCACAGCCAGGTAGTGACTCGGCAGTTTTTCCCCATGGAGGAGGCTGATATGGCCGCCGCATCATCACCGGCTGGAAGCGGCGGTGACGGTGACGGCGACGGCGACGGAGGTGGCTCTACTTTCCCTCGTGCTCACTGGGTAGGCGTGAAATTTTGCCAATCAGAAACACTTGGTGCTGGAAAATCATCACTGGAAGCTTCTCAACCCATGAAAAAAAGTCGCCGAGGACCGCGGTCAAGAAGCTCACAGTACAGAGGAGTCACTTTTTACAGAAGAACCGGTCGATGGGAGTCTCATATTTGGGACTGTGGAAAACAAGTGTATCTGGGTAAGTTGTTATATGTATGTTAA 933 0.4952 MWTVFLDQEAQPLEAGVKEEVEAREVHQAEPEMESRAGARLPITAHRGHLMNYRLGFVTVPDSINANSLPQKHLPSSFFTFFFFELEEELPLPSLGAGVNLRKDIAGAEGERKRSERKKECGISMTHPIGGESSSAVVIEDGSEEEEQQQEEGSVVRATTDMKKSRRSKIFGFSVTHGDDDEEDEDEDSMDSENHSQVVTRQFFPMEEADMAAASSPAGSGGDGDGDGDGGGSTFPRAHWVGVKFCQSETLGAGKSSLEASQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGKLLYVC 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00984 310 Gene3D AP2/ERF domain 276 306 IPR036955 GO:0003700|GO:0006355
Aip01g00984 310 MobiDBLite consensus disorder prediction 174 196 - -
Aip01g00984 310 MobiDBLite consensus disorder prediction 254 277 - -
Aip01g00984 310 MobiDBLite consensus disorder prediction 124 161 - -
Aip01g00984 310 MobiDBLite consensus disorder prediction 211 234 - -
Aip01g00984 310 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 128 303 - -
Aip01g00984 310 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 128 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00984 Aip-Chr1 19222250 19227606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00984 180 304 AP2-EREBP Transcription Factor Family AT4G36920 55.224 1.77e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00984 K09284 - gmx:100792442 187.578