Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00976 ATGATTCAGGCTTCAGCCATGCCTGTGATCCGACTCATCTCAGCCAGCACAATCCAAGCACCGAGTCAAGCCGACTCAGCTCAGAAAATCCACTTAACACCATGGGATCTTGTGTCCCTCCCAATCAAGATAAACCAAAAAGGCCTTCTTTTTCATCACAAACCATCATCATCACAAATTCAGCATCTCAGACACTCCCTTTCCACCACCCTCGCTTTCTTTCCACTCCTCGCCGGCCGTCTCATGGCTACTGAAGGCGAAAACAACACCACCTATTGTCATATCCTCTGCAACAATAAAGGATCCCTCTTTGTCCATGCCATAGCAGAGAACACAAGTGTTGATGATATTCTTCAGCCAACGTACGTTCCTTCCATTGTCAACTCCTTCTTCCCACTTAACGGAGTTAGAAACTGCCAAGGCACGTCTCAGCCGTTGCTTGCGGTGCAGGTCACGGAGCTAGTTGACGGCGTCTTCATCGGCTTCACGATCAACCACGTGGTCGCCGACGGAGAGTCATTATGGCAGTTCATCAATTCATGGTCGGAAATTTCACGTGGCTGCCATAAACTAACTAAAGATCCTTCGCTGGAGCGGTTTTTTCTTGATTCCGTTGAACCTCCATTTCCAATACCAGCACCCTCTCCATTCATGAAGGAGGAGAATCAAAACTGGCAAAACTCAACACCAGAAACACCAGTGAGGGTGTTTCATTACACGAAAGAGAAAATAGCACAACTCAAAGCAAAGGCTAATGCAGAGGCCAAAACAGAGAATATATCTTCGCTGCAAGCGCTTTTGACTCACTTTTGGATATCCGTGATTCGTTGCAGTTTTGTGGACGCGCAAGAAGAGGTTTTCATCTTCTTGCCTATTGGCGTTAGAGGGCGAATTGTTCCGCCGTTGCCAGAGAATTATTTCGGGAACGCTTTGCAGATTGGAGTTGTGAGAATGAAAGCAGGGGAGCTGCTTCAAAGTGGGATCGGAAAGGGTGCTATGGAAATGAACAAGATGGTGGCTTCGCACTGCGATGAGAAGGTGAGGAGCCACTATGTTTCTATGGCGAAGAAGCCGGTCTTGCTTCAACTCGGTGGTGCCGTTGGTGCGAAGGCTTTGGCCACTGGAAGCTCGCCAAGGTTCAATGTTTATGGTAATGACTTTGGTTGGGGAAAGCCTGTGGCGGTTAGGGCTGGTTCGAATATTGGAGAAGGAATGGTTGTTTTATTTGGAGGGAAGGAAGAAGGGAGTGTTGACGTTCAAGTTTGCCTCCCTTATGAGATATTGGAGGCCATGGAAAGTGATTCCGAGTTCATAGATGCCTTCTAA 1326 0.4774 MIQASAMPVIRLISASTIQAPSQADSAQKIHLTPWDLVSLPIKINQKGLLFHHKPSSSQIQHLRHSLSTTLAFFPLLAGRLMATEGENNTTYCHILCNNKGSLFVHAIAENTSVDDILQPTYVPSIVNSFFPLNGVRNCQGTSQPLLAVQVTELVDGVFIGFTINHVVADGESLWQFINSWSEISRGCHKLTKDPSLERFFLDSVEPPFPIPAPSPFMKEENQNWQNSTPETPVRVFHYTKEKIAQLKAKANAEAKTENISSLQALLTHFWISVIRCSFVDAQEEVFIFLPIGVRGRIVPPLPENYFGNALQIGVVRMKAGELLQSGIGKGAMEMNKMVASHCDEKVRSHYVSMAKKPVLLQLGGAVGAKALATGSSPRFNVYGNDFGWGKPVAVRAGSNIGEGMVVLFGGKEEGSVDVQVCLPYEILEAMESDSEFIDAF 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00976 441 Pfam Transferase family 17 437 - -
Aip01g00976 441 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 440 - -
Aip01g00976 441 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 10 440 - -
Aip01g00976 441 Gene3D - 216 433 IPR023213 -
Aip01g00976 441 Gene3D - 9 211 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00976 Aip-Chr1 18792600 18793925 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00976 61 432 Monolignol Biosynthesis Gene Families AT5G48930 30.729 4.24e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00976 - - gmx:100797643 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00976 01 18792600 18793925 Aip01g00976 01 18792600 18793925 ECH