Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00971 ATGGGATCTACTCGCATCATCTCAAGTTGCCTAGTTCAAGAAGCACCAAACCAAAAGGGTTACTGTTCTCAGAAAATCCATCTAACTCCATGGGATCTCACTTTCCTCACCGTTGAATGCATTCAAAAAGGCCTTCTCTACTTCCACAATCACACCAACCAAGAAACCCAATCACCAATCCAAATCATCAATCACCTCAAATCCTCCTTCTCCACCACTCTCGCCTTCTTTCCACCTCTCACAGGCCGTTTCGTCATAACCAACCATAACCACCAAGACGAATACAAAGCCGCCACGTGTCACATCCTCTGTAACAACCAAGGAGCACTCTTCGTCCATGCTATAGCAGAGAACACAACCGTCAACGACATCCTTCAACCCAAGCACGTTCCCTCCGTTGTTCGCTCATTCTTCCCGCTTAACGGCGTTCAGAACCACGAAGGAACGTCGCAGCCGCTGCTCGCAGTGCAAGTCACGGAGTTAGTTGACGGCGTCTTCATCGGCTGCACGCTCAACCATGCCGTTGCAGACGGCAAGTCGTTTTGGCATTTCATCAATTCTTGGGCCGAAATCTCACGTGGCCACAACAAGCCGTCGAAACTTCCTTCACTTGAACGCGCGTTTCTAAACGGCGTTGAGCCTCCTATACGGTTCCCTTTCACAGAAGACTCAGAACTGGAAAAGCAAAAACCGCCACCACCAGAGAGGTTCTTCCACTTCACAAAGGAGAAGATATTGCAGCTCAAATTAAAAGTCAACGATGAAGCCGGAACCGACAAAATTTCTTCGCTGCAAACGGTTTTCGCTCATCTTTGGCACTCTGTGATCCGTTGCAGCAGCGGTTGTGACCCGCAACAAGAGCTCTCTTACCGGTTTCCGGTAGGTGCTAGGCCGAGGATGGTTCCGCCGCTGCCGGATGACTACTTTGGGAATGCAGCTATTGTCGGCGGCGTGACCATGACTGCTGAGAAGCTTCTAGAAGGTGGCACTGCGAAGTGTGCGTTTGAGATGAACAAGATGATAGCTTCGTACACTGATGAAATGTTGAGGAGCCATTATGCTTCTTGGGTGAGAGGCCCAACTTTGCTTAAGCTGCGAAATTTGGCTAACTTCAAGTCCTTGGCCACTGGCAGTTCCCCACGGTTTGATGTTTACGGTAACGACTTTGGGTGGGGGAAGCCTGTGGCGGTTCGAAGTGGCAGCGCAAACAAGCGTAACGGGAAGATTAGCGTGTTTGCTGGGGTGGAAGAAGGCAGCATTGACATTGAAGTGTGCCTTCCTTTTGAGATCTTGGAGGCTTTGGAGAATGATCCTGAGTTCATGGATGCCGTTTCCATCTAG 1341 0.5004 MGSTRIISSCLVQEAPNQKGYCSQKIHLTPWDLTFLTVECIQKGLLYFHNHTNQETQSPIQIINHLKSSFSTTLAFFPPLTGRFVITNHNHQDEYKAATCHILCNNQGALFVHAIAENTTVNDILQPKHVPSVVRSFFPLNGVQNHEGTSQPLLAVQVTELVDGVFIGCTLNHAVADGKSFWHFINSWAEISRGHNKPSKLPSLERAFLNGVEPPIRFPFTEDSELEKQKPPPPERFFHFTKEKILQLKLKVNDEAGTDKISSLQTVFAHLWHSVIRCSSGCDPQQELSYRFPVGARPRMVPPLPDDYFGNAAIVGGVTMTAEKLLEGGTAKCAFEMNKMIASYTDEMLRSHYASWVRGPTLLKLRNLANFKSLATGSSPRFDVYGNDFGWGKPVAVRSGSANKRNGKISVFAGVEEGSIDIEVCLPFEILEALENDPEFMDAVSI 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00971 446 Gene3D - 4 215 IPR023213 -
Aip01g00971 446 Pfam Transferase family 23 441 - -
Aip01g00971 446 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 443 - -
Aip01g00971 446 Gene3D - 220 436 IPR023213 -
Aip01g00971 446 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00971 Aip-Chr1 18765387 18766950 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00971 46 436 Monolignol Biosynthesis Gene Families AT5G48930 27.696 7.75e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00971 - - adu:107480292 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00971 01 18765387 18766950 Aip01g00971 01 18765387 18766950 ECH