Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00967 ATGGAATCCATCCGAGTCATTTCCACAGGCTTAGTCCAAGCACCAAACCAAAGCAATGAATCAACTGAACAGAAGATCCATTTAACCCCATGGGATCTGACTTTCCTCCCACTTGAAACCATCCAGAAAGGCCTTCTATTTCAGAAACCCACTAAAACAGAACACCACCATACACCATTCCAAATCAACAACCTCAAACATTCATTCTCCACCACCCTCGCCTTCTTTCCACCCCTCACTGGCCGTTTCGTCATTACACACCACAACGAAGACAAAGCTGCCACGTGTCACATCCTCTGCAACAACCAAGGAGCACTCTTCGTCCACGCAGTAGCAGAGAACACAACCGTCAACGACATTCTTCAAGCCAAGTACGTTCCCTCCATTGTTCACTCCTTCTTCCCGCTTTACGGCGTTCACAACCACCAAGGCACGTCCCAGCCACTCTTTGCCGCTCAAGTCACGGAGTTAGTTGACGGCGTCTTCATTGGTTGCACTCTCAATCATACCCTCGGAGACGGCAGGTCGTTTTGGCATTTTGTCAATTCTTGGGCGGAAATCTCGCGCAGCGGCTTCAACAACAAACCATCGAAACTCCCTTCACTCGAACGCGCGTTTCTGGTAAACGACGTTGAGCTTCCAATACGGTTCCCTTTCACAGAAAAAGACTTCGAAATCATACCCAATCCAGAACCGCCGCTACCAGAGAAGTTCTTCCACTTCACAAAGGAGAAATTAGCAAGGCTGAAAGCGAAAGCTAACGCAGAAGCTGGCACAGAGAAAATCAAAATCTCTTCACTGCAATCGCTTTTAACACATCTTTGGATCTCTGTTTACCGTTGCAAGCGCGTGGATCCTCAAGATGAACTCTCCTACTTCATTCAAGTTGGAGTTAGGCCACGGTTGGTTCCACAGTTGCCGGAGAGTTACTTCGGAAATGCGGCGATTTTCGACAGCGTGAGGATGAGAGCAAGGGAGCTTCTAGAAGGTGGAATTGGAAAGTGTGCTCTTGAGATGAACAAGATGATAGCTTCGTACACTGATGAGAAGGTGAAGAGTCACTTTGAATCTTGGTTGAGAAACCCAACTTTGTTTACTTTGGGGAAAGTGGCTAATAGTAATTCTTTGTCGACTAGTAGCTCCCAGCGCTTCGATGTTTACGGTAATGATTTTGGGTGGGGAAAGCCTGTGGCGGTTCGGAGTGGCGTCGCAAACAAGCGTGCCGGAAAGATTTCCGTGTTTGCTGGGAATGAAGAAGGTAGTATTGACCTTGAAGTGTGTCTTCCATATGACATCTTGGAGGCTTTGTGGAATGACACTCAGTTCACTATGGATTCCGTTTCATTTCAAGGGGAAGGGTCACATGCAGAGTTATTGGTTGAGAATTGTTAG 1392 0.4734 MESIRVISTGLVQAPNQSNESTEQKIHLTPWDLTFLPLETIQKGLLFQKPTKTEHHHTPFQINNLKHSFSTTLAFFPPLTGRFVITHHNEDKAATCHILCNNQGALFVHAVAENTTVNDILQAKYVPSIVHSFFPLYGVHNHQGTSQPLFAAQVTELVDGVFIGCTLNHTLGDGRSFWHFVNSWAEISRSGFNNKPSKLPSLERAFLVNDVELPIRFPFTEKDFEIIPNPEPPLPEKFFHFTKEKLARLKAKANAEAGTEKIKISSLQSLLTHLWISVYRCKRVDPQDELSYFIQVGVRPRLVPQLPESYFGNAAIFDSVRMRARELLEGGIGKCALEMNKMIASYTDEKVKSHFESWLRNPTLFTLGKVANSNSLSTSSSQRFDVYGNDFGWGKPVAVRSGVANKRAGKISVFAGNEEGSIDLEVCLPYDILEALWNDTQFTMDSVSFQGEGSHAELLVENC 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00967 463 Gene3D - 1 215 IPR023213 -
Aip01g00967 463 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 443 - -
Aip01g00967 463 Gene3D - 220 438 IPR023213 -
Aip01g00967 463 Pfam Transferase family 18 439 - -
Aip01g00967 463 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 2 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00967 Aip-Chr1 18684104 18685630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00967 45 428 Monolignol Biosynthesis Gene Families AT5G48930 26.847 9.20e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00967 - - adu:107480292 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00967 01 18684104 18685630 Aip01g00967 01 18684104 18685630 ECH