Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00964 ATGGCTGAACAAGAAAACCAAGAAATTGGCCACAAGGAACTCGCTCATAAGACTCTCCTTCAGAGCGATGCACTCTACCAGTATATCCTTGAAACGAGTGTGTTTCCAAGAGAGCATGAATGCATGAAGGAGCTCCGTCAGATGACAGAAAAACACCCTTGGGGTCTCATGGCTACCCCACCAGACGAAGGACAACTTATAAACATGCTGGTTAAACTCATAAACGCAAAGAAGACGATGGAAATTGGTGTCTACACTGGTTATTCTTTACTCTCTACTGCTCTTGCTCTTCCTCATGATGGAAAGGAAAATAACAAGGGGGCATTTGATTTTGTCTTCGTGGATGCGGATAAGGACAACTACTTGAACTACCATAAGAGGGTGATTGAGCTGGTGAGAGTTGGGGGATTGATTGGCTACGATAACACTCTATGGAGTGGTGCTGTGGCGGGCCCACCTGATGCACCAATGCTGGATTATGTGAAGCAATTCCGTAGTTATGTCATAGAGGTCAACAAGTACCTCGCGCATGATTCAAGGATCGAGATTTGTCAAATCCCTGTTGCATTCGCAATTATGGAAATGATTTGA 591 0.4467 MAEQENQEIGHKELAHKTLLQSDALYQYILETSVFPREHECMKELRQMTEKHPWGLMATPPDEGQLINMLVKLINAKKTMEIGVYTGYSLLSTALALPHDGKENNKGAFDFVFVDADKDNYLNYHKRVIELVRVGGLIGYDNTLWSGAVAGPPDAPMLDYVKQFRSYVIEVNKYLAHDSRIEICQIPVAFAIMEMI 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00964 196 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 103 192 - -
Aip01g00964 196 Gene3D Vaccinia Virus protein VP39 102 193 IPR029063 -
Aip01g00964 196 PANTHER O-METHYLTRANSFERASE-RELATED 103 192 - -
Aip01g00964 196 PANTHER O-METHYLTRANSFERASE-RELATED 2 102 - -
Aip01g00964 196 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 196 IPR002935 GO:0008171
Aip01g00964 196 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 2 102 - -
Aip01g00964 196 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 22 188 IPR029063 -
Aip01g00964 196 Gene3D Vaccinia Virus protein VP39 8 101 IPR029063 -
Aip01g00964 196 Pfam O-methyltransferase 32 102 IPR002935 GO:0008171
Aip01g00964 196 Pfam O-methyltransferase 103 190 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00964 Aip-Chr1 18544224 18546773 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00964 3 192 Monolignol Biosynthesis Gene Families AT4G34050 54.701 1.05e-91 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00964 K00588 - gmx:100795858 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00964 01 18544224 18546773 Aip01g00964 01 18544224 18546773 ECH