Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00959 ATGTACTGGTTGGTGCAGTATGTACTTGAAACAAGTGTGTATCCAAGAGAACACGAGAGCTTGAAGGAGCTCCGTGAGATGACACAAAACCACCCTCGTAACATCATGGCTACACCACCGGACGAAGGACAACTGATAATGATGTTGGTTAAACTCATAAACGCCAAGAACACCATGGAAATTGGCGTCTACACTGGTTACTCTCTGCTTTCTACTGCCCTTGCTCTTCCTCATGATGGAAAGATATTGGCTATGGATGTGAACCGGGAATATTATGAATTGGGATTGCCCATAATTCAAAAAGCTGGAGTGGCTCACAAGATTGATTTTAGAGAAGGACCTGCTCTTTCTCTTCTTGATGAACTGCTTAAAGATAAAAATAACATGGGAAAATATGATTTTGTTTTCGTGGACGCGGATAAGAACAACTACTTGAACTACCATAAGAGGGTGATTGAGCTTGTGAGGATTGGAGGGTTGATCGGCTATGATAACACCCTATGGTTTGGATCTGTGGCTCAGCCACCTCATGCACCAATGATGGATTTTGTGAAGAACTCTCGCGGTTATGTGATGGAACTCAACAAGCACCTTGCTAGTGATGAAAGAATTGAAATTTGTCAAATCCCTGTTGGTGATGGCATTACCTTGTGCCGCCGTATCATCTGA 669 0.4305 MYWLVQYVLETSVYPREHESLKELREMTQNHPRNIMATPPDEGQLIMMLVKLINAKNTMEIGVYTGYSLLSTALALPHDGKILAMDVNREYYELGLPIIQKAGVAHKIDFREGPALSLLDELLKDKNNMGKYDFVFVDADKNNYLNYHKRVIELVRIGGLIGYDNTLWFGSVAQPPHAPMMDFVKNSRGYVMELNKHLASDERIEICQIPVGDGITLCRRII 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00959 222 Pfam O-methyltransferase 10 221 IPR002935 GO:0008171
Aip01g00959 222 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 4 222 - -
Aip01g00959 222 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 5 220 IPR029063 -
Aip01g00959 222 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 221 IPR002935 GO:0008171
Aip01g00959 222 PANTHER O-METHYLTRANSFERASE-RELATED 4 222 - -
Aip01g00959 222 Gene3D Vaccinia Virus protein VP39 3 222 IPR029063 -
Aip01g00959 222 CDD AdoMet_MTases 60 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00959 Aip-Chr1 18285443 18290193 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00959 4 221 Monolignol Biosynthesis Gene Families AT4G34050 74.771 3.15e-122 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00959 K00588 - gmx:100795858 372.089