Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00955 ATGCCCGACCACCCCACACCGCCAACAATGAACGACCAGCTCTCCAAGCAAACATCAATCTTCGGTCTCCGCCTCTGGGTGGTCGGCGGTGTCTGCGTCGGCGCCGCCATTGTCCTCATCCTCGTCCTCATCTCCCTCTGGCTCGCCTCCAAGCTCTCCACCACCAATAAGAGAAACCGCCACACCATTCCCGACGTCTCCAAAGAAATCCAAGAAATCAAGATAGAGCCCACCCATTCGTCTTCTTCTCCCAAGCCCGTTGGGCTTCCCTGCCAGCCCGACCCCACTCCTGAGCCGGACCCTCACCCGCCGCCACCAGAAGCAGAAGAAAGCAACAACAGCAACAGCAACGCGGCTTTGGGGTTTAAGAGAATTCAGTTTGAGATTGGGAAGAACCATAGAATATCGTACCCGGAACGGGCTTTCGTGAGGTCATCTTCGCAATCGAATCACGAAAGCGGGGAGGCATTGGAGCATAATCAGCAGGCTCCTACGGTGATCCCTGAGGTGTCGCATTTGGGTTGGGGACACTGGTACACCCTTAGGGAGCTTGAAGTTTCCACCAATAGCTTTGCCAACGACAACGTTATCGGCGAAGGAGGCTACGGGATTGTTTACCACGGCATCTTCAACGACAATTCTGGTGTGTTGAATGTGTACTACAACTTCAATTTGAATCGGAACCTTAGAGGTCAAGCTGAGAAAGAGTTCAAGGTTGAGGTGGAAGCTATAGGGCGAGTTCGGCATAAGAATCTGGTGAGGTTGCTCGGGTATTGTGCTGAAGGTGCTCATAGAATGCTTGTATATGAGTACGTTGATAACGGAAACTTGGAGCAATGGCTGCATGGCGATGTTGCAGTTGGACCTTGTAGTCCTCTCACTTGGGAAATTAGAATGAACATAATTCTTGGAACTGCAAAAGGGTTAGCTTATCTTCATGAGGGGTTGGAACCCAAAGTTGTTCATCGCGACATTAAATCGAGCAATATTTTGATTGACAAGCAATGGAATTCAAAGGTGTCTGACTTTGGACTTGCTAAACTCCTTGACTCTGATAGCAACTACATTACAACTCGTGTAATGGGTACATTCGGATACGTAGCTCCTGAATATGCAAGTACCGGCATGTTGAATGAACGAAGTGATGTGTATAGTTTCGGAATCCTTATAATGGAAGTAATTACAGGCAGGAATCCTGTTGATTATAGACGGCCATCGGAGCAGGTGAATTTAGTTGACTGGCTAAAGAAGATGGTTGGTAATAGAAATGCAGAGGGAGTGTTGGATCCCAAACTCCCTGAGAAACCGAATTCAAGGGCCCTAAAGAGAGTACTTATTGTAGCATTGCGCTGCACAGACTCAAATGCACAAAAGCGGCCTAAAATGGGACATATTGTACACATGCTTGAAGCTGAAGAATCCCCTTACAAAGAGGATCGTAGAGCTAGAAGGGAATCGGGATACACGCCCAAGAATAAAATGAAGCTACCAAGAAGCGAAGCTGAGTATAGAATTTACCAAAAAGATTACGATGTGCTTTTAATTTAA 1548 0.4755 MPDHPTPPTMNDQLSKQTSIFGLRLWVVGGVCVGAAIVLILVLISLWLASKLSTTNKRNRHTIPDVSKEIQEIKIEPTHSSSSPKPVGLPCQPDPTPEPDPHPPPPEAEESNNSNSNAALGFKRIQFEIGKNHRISYPERAFVRSSSQSNHESGEALEHNQQAPTVIPEVSHLGWGHWYTLRELEVSTNSFANDNVIGEGGYGIVYHGIFNDNSGVLNVYYNFNLNRNLRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVAVGPCSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILIDKQWNSKVSDFGLAKLLDSDSNYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVITGRNPVDYRRPSEQVNLVDWLKKMVGNRNAEGVLDPKLPEKPNSRALKRVLIVALRCTDSNAQKRPKMGHIVHMLEAEESPYKEDRRARRESGYTPKNKMKLPRSEAEYRIYQKDYDVLLI 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00955 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672|GO:0006468
Aip01g00955 515 Pfam Protein kinase domain 193 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00955 515 Gene3D Phosphorylase Kinase; domain 1 153 271 - -
Aip01g00955 515 CDD STKc_IRAK 197 470 - -
Aip01g00955 515 ProSiteProfiles Protein kinase domain profile. 191 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00955 515 Gene3D Transferase(Phosphotransferase) domain 1 272 487 - -
Aip01g00955 515 MobiDBLite consensus disorder prediction 143 162 - -
Aip01g00955 515 MobiDBLite consensus disorder prediction 474 494 - -
Aip01g00955 515 MobiDBLite consensus disorder prediction 63 115 - -
Aip01g00955 515 SMART serkin_6 191 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00955 515 PANTHER OS01G0323000 PROTEIN 8 497 - -
Aip01g00955 515 PANTHER RECEPTOR-LIKE KINASE PLANT 8 497 - -
Aip01g00955 515 SUPERFAMILY Protein kinase-like (PK-like) 167 470 IPR011009 -
Aip01g00955 515 MobiDBLite consensus disorder prediction 88 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00955 Aip-Chr1 18230952 18233446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00955 135 499 Receptor kinase-like Gene Family AT3G58690 37.838 7.03e-80 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aip01g00955 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00955 - - lang:109350106 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00648 05 8170645 8173876 Aip01g00955 01 18230952 18233446 ECH
Aip01g00955 01 18230952 18233446 Aip01g00955 01 18230952 18233446 ECH