Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00951 ATGGATTGGGTAAGAGGAGACCCTGTTGGTCGAGGAAGCTTCGCCACGGTTAGTTTAGCGTTTTCAAAAAACGGTTCTGCTGATAAATCTTTGGTTTCTCCCACCGCCGTGAAGTCCTGCGAGGTTGGAGCCTCCTACTGGCTCAAGAACGAGAAACACGTGCTCGACCGTCTCGGCAACACGTGCCCACGAATCATCACGTGCTTTGGCGATGATTACACCTTGGAGAATGGCCGCCAATACTACAACCTCTTCCTGGAGTACGCCTCCCGAGGCAGCCTCTCGGATGAGCTTAACCGCCGCGGAGGGTGTATCCCAGAGCTCGAAGTTCGACATCACGTGAAGTCTATCGTGGAAGGCCTCATCCATATTCACAACACTGGATTCGCCCACTGCGACATAAAGCTTCAAAACATACTCATGTTCGAAAACGGTCAGGTTAAGATTGCGGATTTTGGTCTAGCGAAAGAAACAGGGGAGAAACAGGGGAATGAGAAGAAAAATAAGTGTTTCGAATGCAGGGGAACTCCTATGTTTATGCCGCCGGAATTGGTTAACAACGGCGAGTGCGAGTCTCCGGCGGATATTTGGGCCTTGGGGTGTACTGTAATAGAGATGGTAACTGGTAAGCCGGCATGGAACATTGCAAAAGATTCGAATATTTGGTCCTTGATGCTTCGAATCGGAACAGGGGAAGAAGTACCTTGTATTCCAAATGAAATTTCAAAAGAAGGGAAGGATTTCTTGGACAAGTGTTTTGTTAAAAATCCTAAGAAGAGATGGACGGCTGAAATGCTTTTGGATCATCCGTTTCTCGCTTCTCATACTGTTTCATTGAAAGCTGACTTCATGGCTAATAATTATTCGCCGCGAAGCCACTTTGATTTCCCAGACTGGGTTTGTTCTGTTCCAAGCTCTCACGAGCCACAGTCAAATTTTAATTTTGATTCGTTTTCGGCCGTGAATCGAATTCAGAGGCTTGCAACAAAGGATCGAGTGCGGGAGAATTGGCCGGAATCTGATGGTTGGACTTGGACCAGTATCAGGGGAAATTAA 1056 0.4735 MDWVRGDPVGRGSFATVSLAFSKNGSADKSLVSPTAVKSCEVGASYWLKNEKHVLDRLGNTCPRIITCFGDDYTLENGRQYYNLFLEYASRGSLSDELNRRGGCIPELEVRHHVKSIVEGLIHIHNTGFAHCDIKLQNILMFENGQVKIADFGLAKETGEKQGNEKKNKCFECRGTPMFMPPELVNNGECESPADIWALGCTVIEMVTGKPAWNIAKDSNIWSLMLRIGTGEEVPCIPNEISKEGKDFLDKCFVKNPKKRWTAEMLLDHPFLASHTVSLKADFMANNYSPRSHFDFPDWVCSVPSSHEPQSNFNFDSFSAVNRIQRLATKDRVRENWPESDGWTWTSIRGN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00951 351 ProSiteProfiles Protein kinase domain profile. 3 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00951 351 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 311 - -
Aip01g00951 351 ProSitePatterns Protein kinases ATP-binding region signature. 9 38 IPR017441 GO:0005524
Aip01g00951 351 Gene3D Transferase(Phosphotransferase) domain 1 2 329 - -
Aip01g00951 351 SUPERFAMILY Protein kinase-like (PK-like) 3 309 IPR011009 -
Aip01g00951 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Aip01g00951 351 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 311 - -
Aip01g00951 351 CDD STKc_MAPKKK 2 272 - -
Aip01g00951 351 SMART serkin_6 3 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00951 351 Pfam Protein kinase domain 6 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00951 Aip-Chr1 18115415 18116841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00951 1 299 MAP Kinase Kinase Kinase AT4G36950 56.291 1.10e-111 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip01g00951 Pkinase 2.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00951 - - aprc:113858661 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00951 01 18115415 18116841 Aip01g00951 01 18115415 18116841 ECH
Aip05g00652 05 8220863 8222201 Aip01g00951 01 18115415 18116841 PCT