Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00946 ATGTTGGATCTTTTGCTTATTGATTCATTTGAAGGTACTCCTTTGGAATTTTGGATTCGAAAGCCCGCTCTCAACTTGCAACTCTCTATCCTTCTCTTGCAACCCTTTATCCCTCTTTTACAACTCTTGGAAACTTCAATCGGTGCTGCCTCCGCCGGCACACCCTCCATCGGCGCGCCCTCCGTCGGTGTTCACTCTTGCTCGCAAGGCCTCCATCAGCACTCGTTCTCTCTTGCTCAAACCTTACCTCCGTCGACGCTGACTCAATCGTCACTGCCTCTCCCTCAATCGTCGTTCCTCCCTCAATCGACGCTCAACCCTCACCATAACACAAGAAGGGTGTTGAGTTGGGGGGAAGGATATTACAGTGGAGACATTAAGACAAGGAAGACAAGTCAAGGAGTGGAACTCAATTCTGATCAGATAGGGTTGCAGCGGAGTGAGCAGCTTCGAGAGTTATACAAGTCCCGCAAAGCTGTAGAAGCCAGCCCTCAAACCAAAAGGCGTTCAGCAGCACTGTCTCCGGAGGATCTCACAGATACAGAAGGTGAAGAGGCAGGTTGGGACGTGCTAATTACTTGCCATATGCACAAAGTGATGGTAAATCTGATTATGCAGGAGTTGCAAGCTAGAGGAATTAACAATAAGCATACTCTTGCTTATCAGAATCAAGTAGGCCCGATACAGTGGTTGAAACCATATACAGATGAAACTCTCATTGAGCTTGGTCAGATAGGTGTGAAGAGTCTTTTAGCTGTTCCAGTGAGCCTTAAGAGTAAAAGACACTCCTCCTCCTTGTATCTCAGCTTTGTGAGTGAGCACATAGAGACCCTTAAAGAAATTGACATGGAGTACAGGGAGTTTGGACGGTGCATGTGA 879 0.4744 MLDLLLIDSFEGTPLEFWIRKPALNLQLSILLLQPFIPLLQLLETSIGAASAGTPSIGAPSVGVHSCSQGLHQHSFSLAQTLPPSTLTQSSLPLPQSSFLPQSTLNPHHNTRRVLSWGEGYYSGDIKTRKTSQGVELNSDQIGLQRSEQLRELYKSRKAVEASPQTKRRSAALSPEDLTDTEGEEAGWDVLITCHMHKVMVNLIMQELQARGINNKHTLAYQNQVGPIQWLKPYTDETLIELGQIGVKSLLAVPVSLKSKRHSSSLYLSFVSEHIETLKEIDMEYREFGRCM 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00946 292 Pfam Ferrochelatase 198 287 IPR001015 GO:0004325|GO:0006783
Aip01g00946 292 CDD Ferrochelatase_C 194 287 IPR033644 -
Aip01g00946 292 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 200 288 - -
Aip01g00946 292 PANTHER FERROCHELATASE 200 288 IPR001015 GO:0004325|GO:0006783
Aip01g00946 292 MobiDBLite consensus disorder prediction 156 180 - -
Aip01g00946 292 Gene3D - 191 291 - -
Aip01g00946 292 SUPERFAMILY Chelatase 200 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00946 Aip-Chr1 17878023 17881372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00946 114 182 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 61.333 1.06e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00946 K01772 - aip:107636116 261.151