Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00944 ATGGCGGCCAAAACCAGCGATGACTGCGACAAGGGCTTCGCAGACAGCTACATGCTGCTGAAGCACGAAGACGCCCGGTTCTTCGATCTGCTTCACGTCCTCACTTCGCGAAACATGTCGCGAAGGAGGTTTGTGGAGAGCCACGCGGATGGCGAAGTGGACGAGAGCTTCGGCCACCGGTGGCTTATATTTATCTCTATCTTGTCCCAGAAGCTCTTGCAGTTTGTGGCCAAGCCATTAGCATTCTTTGGGATCTGCGTTGAGCTTCTCATCAACTTGATTGCCCTCAACGGTGGTATCTTCTATATCATATTTAACTTCCTAAGAGGGAAGTTAGTGTTGCCGGATCCAAGATCAGCAAAGTATTTGTCTTGTATTGGGAATTTAGATGTGCGAGTAAAATTGGATGGCATCACTCGTGAAGATAGCAAATACTATATTGCACTTTCTATGATGGCCTCAAAAGCATCCTATGAAAATGCTGCTCATATTGAAACTACTGTCGAAGATCACTGGAAGATGGAATATGTGGGCTTCTTTGACTGCTGGAATGAGTATCAAGAAAAGGCGTCAACTCAAGTGTTGATAGCTTTAGACAAACACCAAAACCGGGACACATATGTTGTGGCCTTCAGAGGAACAGAACCCTTCAACGCGGACGATTGGTGCACGGACATCGACATCTCATGGTACGGAATCCCCGGCGTGGGAAGAATGCACGGCGGCTTCATGAAAGCATTAGGGCTACAAAAGAATGTGGGGTGGCCAAAGGAAATGGAAAGAGACGAGCGTCTTCCGCCATTAGCATATTATGTTATTAGGGACATTCTAAGAAAAAGGCTGAGTGAAAATGAGAAAGCAAAGTTCATAGTAACGGGTCATAGTTTGGGAGGTGCACTTGCAATATTGTTTGGGACAGTGTTGTTTTTGCATGAAGAGACGTTGTTGTTGGAGAGGCTTGAAGGGATCTACACGTTTGGGCAACCGAGAGTTGGAGATGAAGCATATGCAATTTATATGAAACAGAAATTGAAGGAACATTCGGTAAGGTATTGTAGGTTTGTTTATTGCAATGATATAGTTCCGAGGTTGCCGTACGATGATAAGGAAATGATGTTCAAGCACTTTGGAATATGCCTTTTCTTTGATTGGCGATATCAGCTCAAGGTTCTTGAAGAAGAACCGAACAAGAACTACTTCTCGCTATGGTGTGTGATACCCATGACAATGAATGCAATTTTGGAACTAATAAGGAGCTTTACTATTGCATACCAAAATGGACCTCACTACAAAGAAGGATGGCTTCTATTTGCTTTCAGGGTTATTGGGGTATTAATTCCAGGCTTACCTGCTCATGGTCCCCAAGATTATCTTAATTCCACTCTTTTGGGACCAATAGAAAAACACTTAAAAGCAGAGTGA 1422 0.4395 MAAKTSDDCDKGFADSYMLLKHEDARFFDLLHVLTSRNMSRRRFVESHADGEVDESFGHRWLIFISILSQKLLQFVAKPLAFFGICVELLINLIALNGGIFYIIFNFLRGKLVLPDPRSAKYLSCIGNLDVRVKLDGITREDSKYYIALSMMASKASYENAAHIETTVEDHWKMEYVGFFDCWNEYQEKASTQVLIALDKHQNRDTYVVAFRGTEPFNADDWCTDIDISWYGIPGVGRMHGGFMKALGLQKNVGWPKEMERDERLPPLAYYVIRDILRKRLSENEKAKFIVTGHSLGGALAILFGTVLFLHEETLLLERLEGIYTFGQPRVGDEAYAIYMKQKLKEHSVRYCRFVYCNDIVPRLPYDDKEMMFKHFGICLFFDWRYQLKVLEEEPNKNYFSLWCVIPMTMNAILELIRSFTIAYQNGPHYKEGWLLFAFRVIGVLIPGLPAHGPQDYLNSTLLGPIEKHLKAE 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00944 473 SUPERFAMILY alpha/beta-Hydrolases 142 385 IPR029058 -
Aip01g00944 473 Pfam Lipase (class 3) 208 368 IPR002921 GO:0006629
Aip01g00944 473 Gene3D alpha/beta hydrolase 137 409 IPR029058 -
Aip01g00944 473 CDD Lipase_3 144 383 - -
Aip01g00944 473 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 7 473 - -
Aip01g00944 473 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 7 473 IPR044819 GO:0004806|GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00944 Aip-Chr1 17867117 17873559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00944 5 463 Acyl Lipid Metabolism Gene Families AT5G67050 51.064 2.32e-167 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aip01g00944 Lipase_3 1.8e-38 CL0028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00944 - - adu:107480219 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00944 01 17867117 17873559 Aip01g00944 01 17867117 17873559 ECH