Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00937 ATGGGAAACAGTGAGGAAGAGAAATCTAGTCAGACTGAAAAGACTTCTCCACCTGAGCAGGCCAATATTCATGTCTATCCTGACTGGGCAGCCATGCAAATGTATTATGGGCCGAGAGTCGCCATACCACCATACTACAACCCCGCTGTGGCTTCTGGTCACACTCCTCACCCATACATGTGGGGGCCTCCTCAGCCTATGATGCCACCTTATGCAGCACTTTATTCACCTGGAGGGGTTTATACTCACCCTGCCATTCCTATTGAGCCACATCCACACGGACAAGGAGTTCCATCTTCACCTGCTACTGGGACACCTCTAAGTATGGAGACGCCACCAAAATCTGCAAATTCTGATCGGGATTTGATGAAGAAACTGAAAGGGTTTGATGGCCTTGCAATGTCAATTGGGAATGGCCATACTGATAGTACAGAGCTTAGAACTGAAAACAAGCTGTCACAGAGTGTGGATACTGGGGGTTCTAGTGATGGAAGTGATGGCAACACTGCGGGGGCTAATCAAACACCAAGGAAAAGAAGCTGTGAGAGAACACCAGCCACTAATGAAGAAGGAAAACCTGAGATGCAAGCTAATCCAGTAACTCCAGCTTCCAAAGAGACTGCAGCTTCTAACAAGAACATGACAATTGCCCCTGCTAGTGTTTCAGGACAGTTAGTTGGATCTGTAGTTTCTTCAGGCACCACTACGGCGCTAGAGCTGAGGAACCCTTCCAGTGTACATTCTAAAACAAATGCTGCAACTGCCCTGCAACCAGTATTGCCTGCTGAAGCTTGGATGCAGAATGAACGCGAGCTGAAACGTGAGAGGAGAAAACAATCAAATCGAGATTCTGCTAGAAGGTCCAGACTGAGGAAGCAGGCAGAGACTGAAGAACTGGCACGAAAAGTTGAATCCTTGAGTGCCGAGAATGTGTTGCTGAAATCAGAAATAAATCGACTAACTGAAAGTTCTGAAAAGATGAGGGTGGAAAATGCTACATTAGGGGAAAAACTCAAAAACGCTCAGATGGTACAAACAGAAGGGATAATATTGAAGGGAATTGAAAGCAAGAGTGCAACACCTATGAGCACAGAGAACTTATTATCAAGAGTCAACAATAATTCGAGTTCTAATGATACAGGCGGTGAGGACGAGAATGGTTTTTGTGACAGAAAATCAAACATTGGTCCAAAGTTGTATCAGCTGCTGGATACAAGTCCTAGAGCTGATGCTGTAGCAGCTGGTTGA 1248 0.4575 MGNSEEEKSSQTEKTSPPEQANIHVYPDWAAMQMYYGPRVAIPPYYNPAVASGHTPHPYMWGPPQPMMPPYAALYSPGGVYTHPAIPIEPHPHGQGVPSSPATGTPLSMETPPKSANSDRDLMKKLKGFDGLAMSIGNGHTDSTELRTENKLSQSVDTGGSSDGSDGNTAGANQTPRKRSCERTPATNEEGKPEMQANPVTPASKETAASNKNMTIAPASVSGQLVGSVVSSGTTTALELRNPSSVHSKTNAATALQPVLPAEAWMQNERELKRERRKQSNRDSARRSRLRKQAETEELARKVESLSAENVLLKSEINRLTESSEKMRVENATLGEKLKNAQMVQTEGIILKGIESKSATPMSTENLLSRVNNNSSSNDTGGEDENGFCDRKSNIGPKLYQLLDTSPRADAVAAG 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00937 415 Coils Coil 289 323 - -
Aip01g00937 415 Coils Coil 262 282 - -
Aip01g00937 415 Pfam bZIP transcription factor 269 331 IPR004827 GO:0003700|GO:0006355
Aip01g00937 415 MobiDBLite consensus disorder prediction 98 115 - -
Aip01g00937 415 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 271 334 IPR004827 GO:0003700|GO:0006355
Aip01g00937 415 MobiDBLite consensus disorder prediction 136 226 - -
Aip01g00937 415 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 415 IPR044827 GO:0003700|GO:0006355|GO:0043565
Aip01g00937 415 MobiDBLite consensus disorder prediction 137 181 - -
Aip01g00937 415 MobiDBLite consensus disorder prediction 240 255 - -
Aip01g00937 415 Pfam G-box binding protein MFMR 1 87 IPR012900 -
Aip01g00937 415 Pfam Disordered region downstream of MFMR 119 250 - -
Aip01g00937 415 MobiDBLite consensus disorder prediction 359 383 - -
Aip01g00937 415 SMART brlzneu 269 333 IPR004827 GO:0003700|GO:0006355
Aip01g00937 415 MobiDBLite consensus disorder prediction 359 392 - -
Aip01g00937 415 SUPERFAMILY Leucine zipper domain 272 327 IPR046347 GO:0003700|GO:0006355
Aip01g00937 415 MobiDBLite consensus disorder prediction 267 300 - -
Aip01g00937 415 MobiDBLite consensus disorder prediction 85 120 - -
Aip01g00937 415 Gene3D - 272 327 - -
Aip01g00937 415 MobiDBLite consensus disorder prediction 200 226 - -
Aip01g00937 415 MobiDBLite consensus disorder prediction 1 22 - -
Aip01g00937 415 PANTHER G-BOX-BINDING FACTOR 3 1 415 - -
Aip01g00937 415 MobiDBLite consensus disorder prediction 240 300 - -
Aip01g00937 415 CDD bZIP_plant_GBF1 274 322 IPR045314 GO:0003700|GO:0006355
Aip01g00937 415 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 276 291 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00937 Aip-Chr1 17621126 17624635 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00937 1 415 bZIP Transcription Factor Family AT2G46270 47.887 2.76e-100 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip01g00937 MFMR_assoc 5.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00937 K09060 - gmx:100781875 587.03