Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00931 ATGGTAACAGTCAACTTGGAAGATGTATTGTACACACGGAATGACGATGGTGTTAATTACGGCGATGTTGCTTCTCTCACCGACGATGACATATTAAGAAAGGTATTTCGAACGGAAGAAGATGCATATGATTTCTATCAGAAGTTTGGGAGGTTTCATGGTTTTGGAATTTGTAAGGGGGATATGTTTAAGGATGGAGGTGGGAACCTAATTAGGCGAAGATTTTTTTGCAATAGAGAAGGGCTCAGACATAGAAAACATTACAATCGGGTGGATAGGAGGAGGCCTCACAAGCCGGAGACAAGGACAAACTGTGAGGCGAGGATGTGCATATACCTTGACAGGAGCAATAACATCTGGAGGGTGAAGAAGGTTATCACGAAGCACAACCATGCGCTCACACATCCTGGCATGGTCCACCTAATTCCAAATTTTCGGTCCATGACAGAAGCGGAAAAAGCTCAAATAGATGGGATGCAAGGGTGTGGAATCTCGACCTCGAAGACGATGCAGTACCTGGCCGGCATGGCCGGTGGGTATTCTCTAGTTGGTTTCCTGAAGAAGGATGCCTATGACTACGTCGACAGGAGTAGGCGTGCTAGAATCGCCGATGGGGATGCGAACTCGGCTATAATGTACCTGGAGGGAAAAGTTGATGCTAACCTGATGTCTATGGCACGGTATAATGATACCGTGGATGACATGCTAGCGAATTTACTCTGGGCAGACGGTGGTAGCAGGCTTGACTACCAGTACTTTGGCGATGTTCTTGCATTCGACTCAACATATAAGAAGAACAAGTATGACAGGCCGCTGGTTATTTTTTCTGGTAGTAACCACAAGCAAACTTGTATATTTGGGTTTGGGTTGGTGTTAGATGAGAGCATCGCATCATATACATGGCTGTTGGAGAATTTTTTGGAGGTCATGTGCAACAAGGTGCCATCGGTTGTTGTGACTGATGAAGATGATTTAATCCGGGAGGCTGTTCGAAAAGTTTTTCCGGATGCAACCCATCGGCTTTGTGCATAA 1032 0.4564 MVTVNLEDVLYTRNDDGVNYGDVASLTDDDILRKVFRTEEDAYDFYQKFGRFHGFGICKGDMFKDGGGNLIRRRFFCNREGLRHRKHYNRVDRRRPHKPETRTNCEARMCIYLDRSNNIWRVKKVITKHNHALTHPGMVHLIPNFRSMTEAEKAQIDGMQGCGISTSKTMQYLAGMAGGYSLVGFLKKDAYDYVDRSRRARIADGDANSAIMYLEGKVDANLMSMARYNDTVDDMLANLLWADGGSRLDYQYFGDVLAFDSTYKKNKYDRPLVIFSGSNHKQTCIFGFGLVLDESIASYTWLLENFLEVMCNKVPSVVVTDEDDLIREAVRKVFPDATHRLCA 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00931 343 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 30 342 IPR031052 GO:0006355
Aip01g00931 343 Pfam FAR1 DNA-binding domain 44 134 IPR004330 -
Aip01g00931 343 PANTHER OS02G0262500 PROTEIN 30 342 - -
Aip01g00931 343 Pfam MULE transposase domain 256 342 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00931 Aip-Chr1 17567098 17568129 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g00931 FAR1 8.7e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00931 - - adu:107493380 506.523