Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00923 ATGCTGACATGGCCACTTAACAGCGGAGACGATGACAATGTTTCTGTTTTGGATTATGCTGAATCTGATTTTGAGGTTGAGATTAAGAGAAGACATAGCGTTAGCAATGCTCCTTTGCCTCGGCCTGCGAGTTTGAATGAGTTCGACATAATTTTGTTTTCCAAGGAATTCGATCTATCTGGATTGTTCGAGGAAAAAATGGACGAGGTGAGGTTTATGACGTCGGCGCTGATTGGGAAGATTATATCGAAATTGGAGGAGATTGCACATTTGGTTATATTCTCGATGAGGAAGAAGGATTGA 303 0.4158 MLTWPLNSGDDDNVSVLDYAESDFEVEIKRRHSVSNAPLPRPASLNEFDIILFSKEFDLSGLFEEKMDEVRFMTSALIGKIISKLEEIAHLVIFSMRKKD 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00923 100 Pfam NAF domain 42 98 IPR004041 GO:0007165
Aip01g00923 100 ProSiteProfiles NAF domain profile. 40 64 IPR018451 GO:0007165
Aip01g00923 100 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 20 100 - -
Aip01g00923 100 Gene3D Kinase associated domain 1, KA1 40 100 - -
Aip01g00923 100 PANTHER - 20 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00923 Aip-Chr1 17390292 17390823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00923 6 100 CBL-interacting serine-threonine protein kinases AT5G45810 47.115 6.38e-21 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00923 - - adu:107468323 153.295