Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00903 ATGAGGGATCCGTCCGGCCTCTACGTGGCGGTGCAGAGAATGGTGTCGGTAGATGGTGGTGATTTAGCGACATTGGAGAAGAAGAAGAGAGTGAGAAGTGAGGGCTTGGTGCTGGTGGAGTGTGAGAATTTAACTCGCGAGTTTGACAACCATGCCGATGATAGTTGGGGACATTATTGTGGGAGTGATGGCGAATATGATGATGAGGAGGGCTTTGAGGCCCGAGGGGGTCCCGAAGCGGGGGAGAAATGTGTAGGGGATGTTGTTGATGGTAAGGGGTCTGGTGGTGCAAATGATGTAGAAGGCGGCAGTCCGAGCCAGAAAGTCGTCGCAGAAGACTTATTGGGTAGAGAGTTTGATACAGAGGAGGATGCCTATGTTGTCTACAAGGATTTTGCTAGATTCAGGGGTTTCAGAGTTCGGAAGGGAGATGTAGGTCGTGTTAATGGAGTTTTGGTAAGGAGAGACTTTTTCTGCCATCGACAAGGTACAAGTCATCATAAACACTGTGACCGTCCTGGGCGAGTAAGGGAGGAGAGGCTGGAGAATCGAACGGATTGTAAGGCCAAATTGAAGATTTACTACGATATGCAACAGAGCATGTAG 606 0.495 MRDPSGLYVAVQRMVSVDGGDLATLEKKKRVRSEGLVLVECENLTREFDNHADDSWGHYCGSDGEYDDEEGFEARGGPEAGEKCVGDVVDGKGSGGANDVEGGSPSQKVVAEDLLGREFDTEEDAYVVYKDFARFRGFRVRKGDVGRVNGVLVRRDFFCHRQGTSHHKHCDRPGRVREERLENRTDCKAKLKIYYDMQQSM 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00903 201 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 110 197 - -
Aip01g00903 201 Pfam FAR1 DNA-binding domain 129 195 IPR004330 -
Aip01g00903 201 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 110 197 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00903 Aip-Chr1 16752771 16753645 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g00903 FAR1 8.9e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00903 - K17604 aip:107615800 218.779