Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00891 ATGCGGTGGATACACCTTACGTTTACCAAAGACAAAGACAAAAACAACTATTACGCTTCTTCTTCTTCTTCCTCCTCCTCTTCTTCTTCTTCCGTCGTTGAAAACCACAAGAAAGCATGGCGGTTCCGCAACGGGAACAAGAAGCGTCTCAACAACGATGGAAAGTCCGCTAACAGTTACAAGAAGCATGTTGACGTGGAAGAGGAGGCTGCCGTGGCGATTACGACAACCTCTCCTTCCGGCATTCGCACCACATCCACCTCCTCCTCTGCGTCAGCGTCTTCCTCCTCTTCCTCCGCCATGCCTCTCCCGTTGCCTTTGCCGCAGCGTGATGCAGAATGTCGCCAACCGTCACCTGTAAGAACCTCCAGCGGCGCTAGCTCCAATGGCTATCGATCCGCGGAGGATCGCGATCAAACTGATGCTGCGGCAGCTGTCAACGGTTCATCCTTCACGGGCTTCAAGATGAGGAGTGTTTTTGCTAGCAACCGAGACACAAGGCGGAAGGCTGATCAGGTAGAAAATCGCTTGTCACCGAGATCTCAAGAAAACTATTGCTTAAGCCACTCCGGCAGGAGTGGTTCGAGTAGTCCCTTTGCAAGTCCCAAGATCAGTCCGTGTAGCACAGATGATTTCGTGCCATATCATTATGTGGCTCCAAAAGGAAACCAATTCTGGTCTGCACCGGAGATAACTAATTCAGAATCATCCATTCATCCAATCTTTGATTTATCGGCGTCTGGCACCGAAACCTCGCCAAAGGGAAGACCTCAGCTACTCCATGTTAAGAGCTCAAGTGGACCTCCATCACCCTTGCACGGCGGCATGATGAATGAGACTGCATCAGCGCGCCGGGCTGAAGGTAATTCTGTCAGTGTCCACCGTTTACCCCTGCCTCCCATGCCCAACTCACCTACCCTAACCGCTGCAACTACCTACTCCCACGCCCCGGGGAGATCAGAATCTTTGCCAATGAAAAGCCAATGGAAGAAAGGGAAACTTATTGGTCGTGGCACGTTTGGAAGTGTTTATGTTGGCACTAATAGAGAAACTGGAGCATTGTGTGCTGTGAAAGAAGTAGAATTATGTCACGAGGATCCAACTTCCATAGAGTCTATAAAGCAGTTAGAGCAGGAAATTAAAGTTCTTAGCCAACTGAAACATTCAAATATTGTGCAGTACTATGGTAGTGAAGTAGTTGAAGACAAATTCAATATTTATCTGGAATATGTACATCCTGGTTCAATTAATAAATATGTCCGCGACCATTGTGGCGCCATAACAGAATCGGTCGTTAGGAATTTTACTCGCCATATTCTTTCGGGGTTGGCATACTTGCATAGCAAGAAAACAATTCATAGGGACATTAAAGGGGCTAATTTGCTTGTCGATTCGGCAGGAGTTGTCAAACTTGCTGATTTTGGAATGGCAAAGCATCTTAATGGATATGAAGGTAATCTCTCTTTGAAGGGAAGTCCATATTGGATGGCTCCAGAGCTTATGCAGACTGTTGTTATGCATAAGGATAACAACTCGGATCTAGCTTATGCTACTGATATTTGGAGCCTCGGTTGTACAATCATTGAAATGTTCAATGGGAAGCCTCCATGGAGCGAGTTCGAAGGAGCTGCAGCAATGTTTAAGGTTATGAAAGATACCCCGCCTATACCGGAAACATTGTCATCCGAAGGCAAAGATTTCTTGAGGTGCTGCTTTAGAAGAAATCCGGCAGAGCGACCTACTGCTGCAATGTTACTCGAACATCGATTTTTGAAGAACTCTCAACCGATGGATGTTACACCTTCCACTCAATTGTACAATGGAACAACAATCATGGATAAAACTCTAGGCCCTCATAGTCCCACAGGGCATCTAGAAAATATACCTGATCAGATATCTATCACGTGCGAGAAGATTGCGAAGTTGAAAGCTGCAGAGCGGCGAGGAATTCTTATTCCTAACTTGGATATCTTGCCAGCATTCCAAAGACAATAA 1995 0.4642 MRWIHLTFTKDKDKNNYYASSSSSSSSSSSSVVENHKKAWRFRNGNKKRLNNDGKSANSYKKHVDVEEEAAVAITTTSPSGIRTTSTSSSASASSSSSSAMPLPLPLPQRDAECRQPSPVRTSSGASSNGYRSAEDRDQTDAAAAVNGSSFTGFKMRSVFASNRDTRRKADQVENRLSPRSQENYCLSHSGRSGSSSPFASPKISPCSTDDFVPYHYVAPKGNQFWSAPEITNSESSIHPIFDLSASGTETSPKGRPQLLHVKSSSGPPSPLHGGMMNETASARRAEGNSVSVHRLPLPPMPNSPTLTAATTYSHAPGRSESLPMKSQWKKGKLIGRGTFGSVYVGTNRETGALCAVKEVELCHEDPTSIESIKQLEQEIKVLSQLKHSNIVQYYGSEVVEDKFNIYLEYVHPGSINKYVRDHCGAITESVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLNGYEGNLSLKGSPYWMAPELMQTVVMHKDNNSDLAYATDIWSLGCTIIEMFNGKPPWSEFEGAAAMFKVMKDTPPIPETLSSEGKDFLRCCFRRNPAERPTAAMLLEHRFLKNSQPMDVTPSTQLYNGTTIMDKTLGPHSPTGHLENIPDQISITCEKIAKLKAAERRGILIPNLDILPAFQRQ 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00891 664 MobiDBLite consensus disorder prediction 36 62 - -
Aip01g00891 664 MobiDBLite consensus disorder prediction 162 202 - -
Aip01g00891 664 MobiDBLite consensus disorder prediction 14 35 - -
Aip01g00891 664 SMART serkin_6 329 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00891 664 SUPERFAMILY Protein kinase-like (PK-like) 319 613 IPR011009 -
Aip01g00891 664 MobiDBLite consensus disorder prediction 116 133 - -
Aip01g00891 664 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 636 - -
Aip01g00891 664 Gene3D Transferase(Phosphotransferase) domain 1 325 615 - -
Aip01g00891 664 ProSiteProfiles Protein kinase domain profile. 329 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00891 664 MobiDBLite consensus disorder prediction 77 145 - -
Aip01g00891 664 ProSitePatterns Protein kinases ATP-binding region signature. 335 358 IPR017441 GO:0005524
Aip01g00891 664 MobiDBLite consensus disorder prediction 246 277 - -
Aip01g00891 664 MobiDBLite consensus disorder prediction 177 202 - -
Aip01g00891 664 Pfam Protein kinase domain 330 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00891 664 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 636 - -
Aip01g00891 664 MobiDBLite consensus disorder prediction 162 176 - -
Aip01g00891 664 MobiDBLite consensus disorder prediction 14 62 - -
Aip01g00891 664 MobiDBLite consensus disorder prediction 77 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00891 Aip-Chr1 16466828 16470973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00891 36 635 MAP Kinase Kinase Kinase AT5G66850 51.654 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip01g00891 Pkinase 4.1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00891 - - gmx:100790701 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00687 05 8704967 8707721 Aip01g00891 01 16466828 16470973 PCT