Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00885 ATGTCAAGTAGATCATTAGATGGACAAGCTCAAAAACAGAGGAGCAAGTCAATGGCAAAATCCTTCAATTTAAGTCTATCACCAAAAGGAAAAAGAAAAGAAAACTATCATCTTATCATTTCCACCCTACTATTTACAAAACCATATGCCATCAACCAAGAAATTCTAGTTGTTGTTGTTGTAATAGTTGTAGTTCTAGTTGTTGTTATTGTTGCAATACTTGAAGTTGCTGTTGTTGTTGAAATACTTGTAGCTCTAGCTGTTTTTGTTGTTGTTGGGTCAACGGTAGTGCTTGCTGCTATGATGGGAGCAGCAACTGGCCCCAAGAGGGGATCAATTCTGTTCATGAGCAACATAGGAGATTCCCGAGCAATCATGGGATCCAATGACAGCAATGACTCCATGGTGACAATTCAGTTGACAATTGATTTGAAACCTGATTTGCCAAGGGAAGCTGAAAGAATCAAAAGGTGCAAGGGCAGGGTATTTGCTTTGCAAGATGAACCAGAAGTTCCAAGGGTGTGGTTACCTTTTGATGATGCACCTAGATTAGCAATGGCTAGAGCATTTGGCGATTTTTGTTTGAAGGATTACGGTGTCATTTCTATACCAGAATTTTCTCACCGCTTCTTACAGACAAAGACGAGTTCATTGTTCTTGCCTCTGATGGAGTAA 675 0.397 MSSRSLDGQAQKQRSKSMAKSFNLSLSPKGKRKENYHLIISTLLFTKPYAINQEILVVVVVIVVVLVVVIVAILEVAVVVEILVALAVFVVVGSTVVLAAMMGAATGPKRGSILFMSNIGDSRAIMGSNDSNDSMVTIQLTIDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPRLAMARAFGDFCLKDYGVISIPEFSHRFLQTKTSSLFLPLME 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00885 224 Gene3D - 78 221 IPR036457 -
Aip01g00885 224 PANTHER - 104 214 - -
Aip01g00885 224 PANTHER ALPHABET, ISOFORM E-RELATED 104 214 - -
Aip01g00885 224 Pfam Protein phosphatase 2C 93 213 IPR001932 -
Aip01g00885 224 ProSiteProfiles PPM-type phosphatase domain profile. 1 224 IPR001932 -
Aip01g00885 224 CDD PP2Cc 100 211 IPR001932 -
Aip01g00885 224 SUPERFAMILY PP2C-like 87 213 IPR036457 -
Aip01g00885 224 SMART PP2C_4 15 220 IPR001932 -
Aip01g00885 224 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00885 Aip-Chr1 16314592 16317734 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00885 109 214 PP2C-type Phosphatase Gene Family AT1G03590 83.019 1.69e-61 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00885 - - aip:107612736 198.749