Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00882 ATGGGAGGAACCACCGCGCGGATCCTAAAGTCAACCCTAAAGGGTTCAAAGTCTCTTGTGTACGAAATCAAGCAATATAACAACGACCTTGATCAACCAAGAGATGAAATTAAAGCTCTGATCAATGAAAATGGTGCAGCTCAAGATTCAGAATCGCCATGCTGCAATTGCTTCTCGTCTTGTTTCCTTTGGTTTGGTAAGTGCTTCTTCTTTCATATCCCTTTCTACAGGATAAGATCGGTGCGGAGCGAGAGGAACAGTTATTGTGATGCGAAGCAGATGCTTTCGAATGTTAGGGACGTTCTTGAACTTCTTAGTAGACAGAAGATCGAGAAGAGGCTTAGCGGCGGTTCAATTAAGCGTCGTCCTTGTGGTTTTCCCGAGAAACCGGGTTTTACTGTTGGATTGGATGAGCCTTTGAGGAGGCTGAAGGTGGAGGTTCTCATGGAGGGTGTTTCGGTAATTGTATTGACTGGACTTGGTGGTTCTGGAAAGACTACTCTGGCTACAATGCTCTGTTTTGATGAACAAGTCAAAGATAAATTCAATGAAAATATATTGTTTGTCACCTTCTCAAAAAATCCCAAGTTGAAGACCATTGTAGAGAGACTATTCGAACAATGTGGATATCAAGTGCCTGAGTTTAAAAACGACAATGATGCAGTTAACCAAATGGTAGTTTTATTGAGGCATATTGGGACAAGACCGACGTTGTTGGTCCTCGATGATGTTTGGCCTGGCTCAGAAGCCCTTGTTGAAAAATTTCAAATTCAAATGTCACAGTACAAGATTCTAGTGACTTCAAGGGTTGCATTTCCTAGATTCGCCTCTCACTTTATCCTAAAACCACTTAATCAAGAAGATGCATTGACGCTTTTCCGTCACTATGCTTTATTGGAAAGAAGCTGCTCAGATATACCAAATGAAGATATTGTCCAAAAGGTTGTAAGTGGTTGCAAGGGTTCACCTCTTGCTATTATGGTGATGGCTAGATCCCTCAGTCGTCAACCTTACGGGTTTTGGCTCAAGATAGTAGAGAAATTGTCACAAGGTCATTCTATACTTGATTCTAATGCTGAATTGGTAAGCTGTCTACAAAAGATCTTAGAAGTATTGCAGAATAAGCCCTTCATAAAGGAGTGTTTCATGGACTTAGGGTTATTCCCCGAAGATCAAAGAATCCCTGTCACTGCTCTCATTGATATATGGAAAGAATTGTATGGACTGGACGATGATGGCCAAGAAGCAATGACTATCATCAATATATTGGACTCCATGAATTTGGTTAAGCTCTTAGTAGCAAGGAAAAGTGTTTGTGGTGTAGACAATTACTATTACAATAACCACTTCCTCGTCCTACATGATCTTGTAAGAGAACTTGCAATTTATCAAAGCAATCAAGAACCAATTGAACGTAGACAGAGACTGATGATTGATGTGAATGAAAATGCTAGCCAACGGTGGCTCGGTAAGAAGCAGAAAGGCATGATGATGGCCCGCATTTCAAGTTATCTGAGACAGTGTGTTAAACAAAAGGCAGTACAAGTCACTGTCCGCACATTGTCAATATCAACTGATGAAGCTTACCCTTCACTCTTGTCCAATGTGAAGACAGATGAAACTGAGGTTTTGATTGTTGATCTCCGAACAAAACAGTACTCGTTCCCAGAATCGATTGAAAAAATGAACAAACTAAAAGTTATCATTGTTACAAACTATGGTTTCCATCCATCTGAACTGAACAATTTTGAGAAACTCAGTTCCTTATCAAACCTGAGAAGAATCAGATTAGAGAGAATTTCTGCTCCTCCGCTTGTCATATTGAAGAATCTAAGAAAAATATCCCTCTACATGTGTAATATGACTCAGGTTTTCCAAAATGGCAACATCCCAATATCGGAAGCATTTCCAAATCTAATCGAATTGAGCATTGACTACTGCAAAGATATGGTTAAATTGCCTAATGAGTTGTGTGATATTACCCCACTAAAGAATATCAGTATTACAAATTGTCACAAGTTTAATGCACTTCCCCAAGACATTGGAAAGTTATCAAAGCTGGAACTTCTAAGGCTTAGTTGTTGTACTGATTTGCAAGGGTTACCGAATTCAATTGGAAGGCTGTCGATTCTGCGTCTTCTTGACATCTCAAACTGCATGAACCTTCCAGATTTACCAGAGGACATTGGAAATCTGCGTAGTCTGAGAAACCTTTACATGACAGGTTGTTCAAATTGCGAATTGCCGTTTTCGGTCGCCAATCTTGAGAATTTAAAAGTCATATGTGATGAAGAAACTGCTGCTTCATGGGAAGCTTTCATGCCAATGATTCCGAATCTAAAGGTAGAGGTGCCTCAAGTTGATGTCAACTTAAATTGGCTTCACCCACTTAGCTCCTAA 2400 0.4 MGGTTARILKSTLKGSKSLVYEIKQYNNDLDQPRDEIKALINENGAAQDSESPCCNCFSSCFLWFGKCFFFHIPFYRIRSVRSERNSYCDAKQMLSNVRDVLELLSRQKIEKRLSGGSIKRRPCGFPEKPGFTVGLDEPLRRLKVEVLMEGVSVIVLTGLGGSGKTTLATMLCFDEQVKDKFNENILFVTFSKNPKLKTIVERLFEQCGYQVPEFKNDNDAVNQMVVLLRHIGTRPTLLVLDDVWPGSEALVEKFQIQMSQYKILVTSRVAFPRFASHFILKPLNQEDALTLFRHYALLERSCSDIPNEDIVQKVVSGCKGSPLAIMVMARSLSRQPYGFWLKIVEKLSQGHSILDSNAELVSCLQKILEVLQNKPFIKECFMDLGLFPEDQRIPVTALIDIWKELYGLDDDGQEAMTIINILDSMNLVKLLVARKSVCGVDNYYYNNHFLVLHDLVRELAIYQSNQEPIERRQRLMIDVNENASQRWLGKKQKGMMMARISSYLRQCVKQKAVQVTVRTLSISTDEAYPSLLSNVKTDETEVLIVDLRTKQYSFPESIEKMNKLKVIIVTNYGFHPSELNNFEKLSSLSNLRRIRLERISAPPLVILKNLRKISLYMCNMTQVFQNGNIPISEAFPNLIELSIDYCKDMVKLPNELCDITPLKNISITNCHKFNALPQDIGKLSKLELLRLSCCTDLQGLPNSIGRLSILRLLDISNCMNLPDLPEDIGNLRSLRNLYMTGCSNCELPFSVANLENLKVICDEETAASWEAFMPMIPNLKVEVPQVDVNLNWLHPLSS 799
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00882 799 Pfam NB-ARC domain 142 352 IPR002182 GO:0043531
Aip01g00882 799 Gene3D - 121 273 IPR027417 -
Aip01g00882 799 Gene3D - 283 361 IPR042197 -
Aip01g00882 799 Coils Coil 23 43 - -
Aip01g00882 799 SUPERFAMILY L domain-like 553 761 - -
Aip01g00882 799 Gene3D - 365 462 IPR036388 -
Aip01g00882 799 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 7 785 IPR039203 GO:0050832
Aip01g00882 799 PRINTS Disease resistance protein signature 154 169 - -
Aip01g00882 799 PRINTS Disease resistance protein signature 231 245 - -
Aip01g00882 799 PRINTS Disease resistance protein signature 319 333 - -
Aip01g00882 799 PRINTS Disease resistance protein signature 706 722 - -
Aip01g00882 799 Gene3D Ribonuclease Inhibitor 492 771 IPR032675 -
Aip01g00882 799 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 385 IPR027417 -
Aip01g00882 799 CDD ABC_ATPase 154 244 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip01g00882 Aip-Chr1 16217099 16221957 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00882 558 738 WRKY Transcription Factor Family AT4G12020 26.794 1.23e-08 57.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00882 - - gmx:100816134 943.34
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00882 01 16217099 16221957 Aip01g00882 01 16217099 16221957 ECH