Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00881 ATGGCGCACACAACGCAAATTGCCGTTCTTGCATCGCTACTTCAACAGGCATCGGAGAGCATCCTTGAAATGCTTCAAACGGCAAGAAAGAGCAATCGGAACAGAGGAGTTCTAAGGTCGGTAATCCTCACAGAGTTGACTCCTCTGTTCAACGAGATCAAGCAATACAATTACGACGACGAACACCTTGATCGACAAAGAGAGCAAATCACGGCTCTTATAACAGAAAATGATGATGACGGTGTAAGCCTATGCAATTGCAATTGCTCTTCTTGGTCGCGCTTGTGGGAAAATTGCTTCTCCTGGCTCGTTCGGCATATAAAGAATAATAATAATAATAATAATAATAACAATGATGATGATGATGATTATGATTGTGATTACTTTGATGAAGCTTTGAGGGAGGATTTGAATGAGACGCTTGAGAAGTTGAGAGAGATTATTGAAGTGCTTAAATGTGGCTGTGTTTCGGAAAGGAGGGGGGTATTTGGTGTTCCAGAGAAGCGAGGGTTCACGGTGGGATTGGAGGAGTCAATGAGGAAATTGAAGGCGGAGGTTATGAGGGAGAGGGATGGCGTGTCTGTCATTGTTTTGACCGGCTTGGCTGGTTCTGGGAAGACCACTTTGGCTACCTCGCTCTGTTGGGATCAACAAGTCAAAGGTAAATTCAAGGAAAATATCTTATTCATCACATGCTCGAAAACATTCAAGATAAAGATAATTGTAGAGAGACTCTTTGAACACTGTGGATATCGAGTGCCAGAGTTTCAAAGCGAAGAAGATGCAATTAACCGAATGGGAGTTTTGCTGAGGCATATTGGAAAAAGTAGTCCAATGTTGTTGGTCCTTGATGATGTTTGGCCTGGTTCAGAATCCCTTGTTGAGAAATTCAAAATACAAACATCATCAGATTACAAGATTCTGGTTACTTCAAGGGTTGCATATCCTAGATTTGGCACCCCATGTATCGTCTTAGAACCACTCAATCATGAAGATGCATTAACACTTTTCAGTCACTTTGCCCAATTGGAAGATAACTACTACTCAATTTTCCAAAATGATGAAGATATTCTCCAAAAGGTTGTAAGAGGTTGCAAGGGTTCACCTCTTGCGATTACTGTGATTGGTAGATCAATAAGAACTCAACCTTATGAATTTTGGCTCAAGATGGTAGAGAAATTGTCACAGGGTCGTTTTATATTTGATTCGAGTGAGGAATTACTAAAATGCCTCGAAAATATTTTGGAAATTTTAGAGGATAAGCCTATCATAAAGGAGTGCTTCATGGACCTAGGGCTATTTCCCGAAGATCAAAGAATCCCTGTTACTGTTCTCTTGGATATATGGACTGAGTTGTATGGAATGGATGATGATGGCATAGAGGCAATGACTATTATCAACACATTAAACTCTATGAATTTGGCTAATGTCTTAGTTTCAAGGAAAAATGCTTGCGACGTTGAAAACTATTACTACAACAACCACTTCATCGTGGTGCATGATCTTCTAAGAGAACTTGCAATTTATGAGGACAATCAAGAAGCAACAGAACATAGACACAGAATGAGCATTGGCATGAACGAACAGAATGGCGAATTTGGGCTTGGGGAGAAGCAGCGAGGCATCATTGCTGAAATCTTTTCAAAATGTTTGAGATGGTGTATTAATAAACAGATGCCGCAACAAATCCATGCACGCACTTTGTCAATAACAATTGATGAAACTTGGCCTTCTTATTGGTCCAATATGCAAACGGCTGACGTTGAAGTTCTGATTTTCCATCTTCGAGCTAAGTTCTTCTCTTTTCCAATGTTCATGGAGAAAATGAGTAAACTGAAAGTTCTCATAGTAACAAATTATGGCTTCTATCCTTCTGAGCTCAACAATTTCAAGCTACTTGATTCCTTACCAAGCCTGAAAAGAATAAGACTAGAGAGAATTTCTGTTCCTTCCTTTGGCCAGTTAAAGAGTCTAAGGAAACTATCCCTCTACATGTGTCATACAAGTCATGCTTTCGAATTTGGTAACTTCAAATTTTCAGAAGCATGTCCAAATCTAGTAGAGTTGAACATTGATTACAGCAAAGATATGGTTGGCTTGCCTAATGGAATCTGCGAAATTCCGTCGCTGAAGAAGCTCTGTGTCACTAATTGCCACAAGCTCTGTTCATTGCCGAAAGAAATTGGAAATCTGAAGAATTTGGAAATCTTGAGGCTCAATTCTTGCACTGATTTGCAAGGATTACCAGAATCCATTGGAATGCTTTCGAATCTGCGACTTCTGGACATATCCAACTGCATAAGCCTTCCAAATTTACCTGAAGAAATTAGTAATCTGTCTGGTCTAAGGAAGCTGTACATGACGAGTTGCGCGAACTGCGAGTTGCCGTCTTTAGTCTCGAATCTTGAGAATTTGAAGGTGACATGTGACGAAGAAACAGCTACTTTATGGGAAGCTTTCATAACATTGATTCCTAATCTAAGGATAGAGGTGCCTCAAGTTGATGTTAACTTAAATTGGCTTCACACAGTTAGCTATTGCTAA 2544 0.3994 MAHTTQIAVLASLLQQASESILEMLQTARKSNRNRGVLRSVILTELTPLFNEIKQYNYDDEHLDRQREQITALITENDDDGVSLCNCNCSSWSRLWENCFSWLVRHIKNNNNNNNNNNDDDDDYDCDYFDEALREDLNETLEKLREIIEVLKCGCVSERRGVFGVPEKRGFTVGLEESMRKLKAEVMRERDGVSVIVLTGLAGSGKTTLATSLCWDQQVKGKFKENILFITCSKTFKIKIIVERLFEHCGYRVPEFQSEEDAINRMGVLLRHIGKSSPMLLVLDDVWPGSESLVEKFKIQTSSDYKILVTSRVAYPRFGTPCIVLEPLNHEDALTLFSHFAQLEDNYYSIFQNDEDILQKVVRGCKGSPLAITVIGRSIRTQPYEFWLKMVEKLSQGRFIFDSSEELLKCLENILEILEDKPIIKECFMDLGLFPEDQRIPVTVLLDIWTELYGMDDDGIEAMTIINTLNSMNLANVLVSRKNACDVENYYYNNHFIVVHDLLRELAIYEDNQEATEHRHRMSIGMNEQNGEFGLGEKQRGIIAEIFSKCLRWCINKQMPQQIHARTLSITIDETWPSYWSNMQTADVEVLIFHLRAKFFSFPMFMEKMSKLKVLIVTNYGFYPSELNNFKLLDSLPSLKRIRLERISVPSFGQLKSLRKLSLYMCHTSHAFEFGNFKFSEACPNLVELNIDYSKDMVGLPNGICEIPSLKKLCVTNCHKLCSLPKEIGNLKNLEILRLNSCTDLQGLPESIGMLSNLRLLDISNCISLPNLPEEISNLSGLRKLYMTSCANCELPSLVSNLENLKVTCDEETATLWEAFITLIPNLRIEVPQVDVNLNWLHTVSYC 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00881 847 PRINTS Disease resistance protein signature 195 210 - -
Aip01g00881 847 PRINTS Disease resistance protein signature 273 287 - -
Aip01g00881 847 PRINTS Disease resistance protein signature 365 379 - -
Aip01g00881 847 PRINTS Disease resistance protein signature 753 769 - -
Aip01g00881 847 Gene3D - 327 410 IPR042197 -
Aip01g00881 847 Coils Coil 134 154 - -
Aip01g00881 847 Pfam NB-ARC domain 176 405 IPR002182 GO:0043531
Aip01g00881 847 SUPERFAMILY RNI-like 604 792 - -
Aip01g00881 847 Coils Coil 401 421 - -
Aip01g00881 847 Gene3D - 155 315 IPR027417 -
Aip01g00881 847 Gene3D - 411 509 IPR036388 -
Aip01g00881 847 Gene3D Ribonuclease Inhibitor 552 816 IPR032675 -
Aip01g00881 847 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 8 832 IPR039203 GO:0050832
Aip01g00881 847 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 431 IPR027417 -
Aip01g00881 847 CDD AAA 173 286 - -
Aip01g00881 847 Coils Coil 499 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00881 Aip-Chr1 16183320 16192670 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00881 648 839 Receptor kinase-like Gene Family AT5G49660 28.054 3.14e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00881 - - gmx:100816134 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00881 01 16183320 16192670 Aip01g00881 01 16183320 16192670 ECH
Aip05g00696 05 8853128 8856635 Aip01g00881 01 16183320 16192670 PCT