Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00859 ATGGCGCTAGTCGGAGGTGAAAGCGGAGAACAAACGTCGTGGGTCGTTGGCGTCGTATCTGGTAGGAGCGAATCGGAGAAGCGGCTTGAGGTCTCTAAAAGGTTAGAGTCACCGTCACGAGTGGACAAGGAGAGTGAGCCGGTAGAGAGAGTTGATATATTTAGTGAAGGGGACGAGGGTGGCAGATTACCTTCATCGGAGTCACCAGGTAGTTCAGGCAATCAAATAAGTGATGATGTGGACACTTCGATGCTTTCAATCGCGGCTGCATTGGCTGATGTTGAATTTCATGGGGTTGAAGAGGCTTATGCAAGATATGTGGAGTATGCAAAGGCGACTAGATTTGCTGTTCGAAAAGGGGATTCCATTAAAGATGATGAAGGCAATGTTGTGAGGAAATTTTTCTATTGCAATCAACAGGGCTTGCCGAAGAAGAAGCATTATGAGAGGGCGGATAGGAAGAGGGCGCATAAGGCGGAGACTAGGACCAGCTGCAATGCGAAGTTCGTTGTGTTCTTAGACAAACAGAATGGCAAGTGGAGGATGAAGACATTTGTTCAAGATCACAATCATGATTTGACTTTGCCTGCTTTCACTAATGTGATGGCATCTCACAGCAACATCAACGAAGGTGATAAATCCCACATTCATAGTATGCACGAAGCAAGATTCCAGACCAGTCGAATCATGGGGTTCTTTGCATATTTGTCTGGTGGTTATCGAAACTTGCACTTCATAAAGAAGGACGTTTACAACTATATCGACGATGTACGTCGCTCTCGGATCGTTCAGGGAGATGCGGCAGCAGCAATAAGTTATCTGAAGGGAAAAACTGAGGTGGATCCATTAGCTATTGTGATGTACACATATTGTCCCAAAAACCACCTTGGTCACTTGTTTTGGTCAGATGGGGCGACGCAATATGACTATGATTGCTTTGGTGATGTGTTGGCCTTTGATTCGACGTATAGGAAGAATCTATACAACCGGCCTTTGCCCAAAGTTGTGGTTATAAATGGAGACGAGTCAATGAAGGATGCTATTGGGACAGAATTCCCTAATGCCATGCATCGACTTTGCACCTGGCACCTAGCGCAGAATGCTGTTTCAAACATCAAGGATAAGGATTTTTGTGCTGCATTTAAGACTGCTGTGTATGGTCATTTTGAGGTAGAGGAGTTTGACCAGTATTGGGCAGACATGATTACTGCATTCGGGCTAGAGGAGAACGAATGGATTTGGGCAACGTACGAGAAGAGGGTACAGTGCGCGAATGCATATTTATGTGATAAATTTTGTGTTGGGTTGAGAACGACGTCAAGATGCGAGGGCATTAATGCATCGCTTAAAAGGTTTATCAAGTCCTCGAATTTCTTGTTGGAGTTGGTCAAGAATCTTGAGCGTCTGGTTAAGGACTATAGGAACAATGAGTTTATTGCAGACTACAAATCTCTATATTCGAAACCGGTCATGACTATAGGACTGGAATCAATTGAAAGGGCCATGTCACAAATCTACACCAAAGAGATATTTTTCAAGGTCAAGAAATAG 1551 0.4429 MALVGGESGEQTSWVVGVVSGRSESEKRLEVSKRLESPSRVDKESEPVERVDIFSEGDEGGRLPSSESPGSSGNQISDDVDTSMLSIAAALADVEFHGVEEAYARYVEYAKATRFAVRKGDSIKDDEGNVVRKFFYCNQQGLPKKKHYERADRKRAHKAETRTSCNAKFVVFLDKQNGKWRMKTFVQDHNHDLTLPAFTNVMASHSNINEGDKSHIHSMHEARFQTSRIMGFFAYLSGGYRNLHFIKKDVYNYIDDVRRSRIVQGDAAAAISYLKGKTEVDPLAIVMYTYCPKNHLGHLFWSDGATQYDYDCFGDVLAFDSTYRKNLYNRPLPKVVVINGDESMKDAIGTEFPNAMHRLCTWHLAQNAVSNIKDKDFCAAFKTAVYGHFEVEEFDQYWADMITAFGLEENEWIWATYEKRVQCANAYLCDKFCVGLRTTSRCEGINASLKRFIKSSNFLLELVKNLERLVKDYRNNEFIADYKSLYSKPVMTIGLESIERAMSQIYTKEIFFKVKK 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00859 516 MobiDBLite consensus disorder prediction 23 57 - -
Aip01g00859 516 MobiDBLite consensus disorder prediction 1 78 - -
Aip01g00859 516 Pfam FAR1 DNA-binding domain 106 194 IPR004330 -
Aip01g00859 516 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 333 515 IPR031052 GO:0006355
Aip01g00859 516 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 91 331 IPR031052 GO:0006355
Aip01g00859 516 PANTHER OS02G0262500 PROTEIN 333 515 - -
Aip01g00859 516 Coils Coil 456 476 - -
Aip01g00859 516 PANTHER OS02G0262500 PROTEIN 91 331 - -
Aip01g00859 516 Pfam MULE transposase domain 321 367 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00859 Aip-Chr1 15643613 15646843 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g00859 FAR1 1.1e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00859 - - ahf:114924656 993.03