Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00858 ATGAAGAACCCTAACATTTCTCCCCTGCAACAACGTACAAACCATACCCTTTCTCCCCTTCCTAACGGCAATAGTAGGTCAGCAGCGTTCAATCGCGCGCACTCCTCCACGCACGGCGACGGCGCGCAGCGTTCAATCGCGGTGCACTCCTCCACGTACGGCGACGGCGCTGTGCTATCCTCGACGGGCGACGGCGCGGTGCTCTCCACAATTCCTAACATAGCCACTGCAACAACGCACAGACCCTTTCTCCCCTTCCTAACGGCGACAGCAGCGCTCAATCGCGGTGCTCTCCTTGACGGGCGCGGTGCTCAATCGCAAGAAACCCCTCTCCCTTCTCTTCTCCTTCTCGTTCTTCCTCTGTTCCTATGTTTCCAGCATGCCGTTGAAGCATTTCTACATCTGTTGTGCTCATTAAGAGAAGAAATTGGAGGTTGTTATGCTCCAAAGATGAGTTCTTTAGCAGACATTTTTGCTTCTAATAATAGAATTCTTACTCAAATACATAGGGACTGGCAAAGTGACACAGGCAATAAAATTGGGACCTATAGCATTACCTTGTGTACCAATTTTCACAAAGTACCTTTTTATGTGGCTGCACCGCTGACTTCAATTGATCTGTCACTTTCTTTCGGAGAAGAAATTGTCATCGAGGAGAGATCTCCGAAGGAGTTGTTGAACATGCGAGGAGGACTTGGAGAGCAAGTTGCTACCTCATGA 720 0.4958 MKNPNISPLQQRTNHTLSPLPNGNSRSAAFNRAHSSTHGDGAQRSIAVHSSTYGDGAVLSSTGDGAVLSTIPNIATATTHRPFLPFLTATAALNRGALLDGRGAQSQETPLPSLLLLVLPLFLCFQHAVEAFLHLLCSLREEIGGCYAPKMSSLADIFASNNRILTQIHRDWQSDTGNKIGTYSITLCTNFHKVPFYVAAPLTSIDLSLSFGEEIVIEERSPKELLNMRGGLGEQVATS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00858 239 Pfam Initiation factor 2 subunit family 175 230 IPR000649 GO:0044237
Aip01g00858 239 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 174 238 - -
Aip01g00858 239 Gene3D - 174 230 IPR042529 -
Aip01g00858 239 MobiDBLite consensus disorder prediction 1 42 - -
Aip01g00858 239 SUPERFAMILY NagB/RpiA/CoA transferase-like 175 230 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00858 Aip-Chr1 15639597 15642261 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00858 175 237 Eukaryotic Initiation Factors Gene Family AT2G05830 73.016 1.94e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00858 K08963 - aip:110263737 125.946