Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00851 ATGTTTCATTCCCATACAAAGCTTTCTATTCTCCTCCTTCTCACAACAATCTTGGTGTTGTTCAACACAACAAGAGGCAAGAACCACAATAACTGCAACCGTAGTTGCGGAGAATATTCCTTGCCGTACCCTTTTGGTTTCTCTGATGATTGCGAAATCAAACTTAACTGCACCACCACCAACAGAAACAAGAGAGTCCAAATTGGAAATCTACAAGTCCAGAACGTAACATCTGAAAGCATATTCATCACTCTCCCGGCCGAATGCAACCGGGGAAAGGATTTTATAGAACCCCTCTTCGGAGAAAACTATGGTCCAACATGGAACAACAGCTTCCTCGTACAAGGCTGTGAACACGAGCTTGGAGGCTGCAATATCCCAATAGCTAGTTTCATTGGGAGCCAGACTGAGATTAAAGGGTGTGATAGAAGAACTGAAAACATTAGTTGCTTCACAAAACCGCGGCATCAAAAGGAACGTGCCGATGTTGTGAGCGTTACGGATTGGCGAGGAATTGGGTGCAGGTCGTTGTTTTCTGCTTTTGCTTTTGATAAGAGTAAAGAGGTATCGCTGCAGTTTCAGGTGGTTGAGTTGGGGTGGTGGCTTCAAGGGTCGTGTGGGATTTGTTCTGAGAATGCGAATTGTGATAAGGTCAATGTTGGAGCAAGTAAGAACGGGTTCAGGTGCCACTGCCATGACGGTTTCAGAGGAGATGGCTTCAACAACGGTACCGGTTGCCAGAAAGTTTCTTATTGCAAGGGCTCAAGATTGAAGTTTGGAAGATGCGGGGAAGGAATCAAAATTGGTGTCCTTAGTGGAGTTGGTGTCTTCCTGGTTGCAGCTGTGTCTCTGGTATGTTACTTCACCAGGCGCCGCGCCAATTGGCTGCGAAAACAAGTTCGAGCAAAGCATATATTACAAGAAGCTGCAGGCAACAACAGTGTCCCTTTCTACCCTTACAAGGAAATAGAAAGAGCCACAGATTTTTTCTCTGACAAAAACAGGTTGGGAACTGGGGCTTTTGGTACAGTTTATGCTGGAAACCTTCACAATGATGAGTGGGTTGCTATAAAAAAGATCAAATACAGGGACACCAATAGTATTGACCAAGTAATGAATGAGATCAAGTTACTATCTTCGGTGAGTCATCCAAATTTAGTCCGCCTCCTCGGCTGCTGCGTAGAGGAAGGAGAACAGATACTTGTTTACGAGTACATGCCGAATGGAACTCTATCACAACATTTGCAGAGGGAGAGGGGTGGAGTACTTTCTTGGACAGTAAGGCTCACAATTGCAACTGAAACCGCCAACGCCATTGCATATCTCCACTCTGCAATAGATCCTCCAATTTATCACAGAGACATCAAATCCAGTAACATACTCTTGGACTATAACTTCCAATCAAAAGTTGCAGACTTTGGCCTTTCCAGGATTGGCATGACAGAAACCTCTCATATCTCGACAGCGCCGCAGGGGACACCTGGCTATGTTGACCCTCAATACCATCAGAATTTCCATCTTTCTGATAAAAGCGATGTGTATAGCTTTGGAGTGGTTCTTGTTGAGATAATAACTGCCATGAAAGTGGTTGATTTCGCAAGGGCTCGTAGCGAGATTAATTTGGCTGCACTTGCTGTTGATAGGATTAGGCGTGGATTGGTAGATGAGATCATTGATCCCTACCTTGAACCACATAGAGATGCTTGGACTCTCTACTCTGTTCACAAGGTAGCCGAGCTTGCGTTTCGATGCCTGGCTTTTCATAGCGACATGAGGCCAACCATGATGGAAGTTGCCGAGGAGCTAGAACACATCAGACGAAGCGGTTGGACGACTATGGAAGAAACCATCTACATGGCTTCACCGGCCGTGTCCGCCTGTTCGTCGCCTCGAAACAGAAGCCAGAAATCAATGAATAGTGTCCATTTTGAGAGAGGGGGACAAGAGAGTGAGGCATTTAGTGTTGTTCCATTGGAAGAGGTAAGGGAGAGTTCCCCTGTTTCTGTGCATGTTGCTTGGTTAAGTGGACCTAGCTCACCCTCAACTAATAGCTTGTTGGGAAATGTAGTTCAGTGA 2076 0.4557 MFHSHTKLSILLLLTTILVLFNTTRGKNHNNCNRSCGEYSLPYPFGFSDDCEIKLNCTTTNRNKRVQIGNLQVQNVTSESIFITLPAECNRGKDFIEPLFGENYGPTWNNSFLVQGCEHELGGCNIPIASFIGSQTEIKGCDRRTENISCFTKPRHQKERADVVSVTDWRGIGCRSLFSAFAFDKSKEVSLQFQVVELGWWLQGSCGICSENANCDKVNVGASKNGFRCHCHDGFRGDGFNNGTGCQKVSYCKGSRLKFGRCGEGIKIGVLSGVGVFLVAAVSLVCYFTRRRANWLRKQVRAKHILQEAAGNNSVPFYPYKEIERATDFFSDKNRLGTGAFGTVYAGNLHNDEWVAIKKIKYRDTNSIDQVMNEIKLLSSVSHPNLVRLLGCCVEEGEQILVYEYMPNGTLSQHLQRERGGVLSWTVRLTIATETANAIAYLHSAIDPPIYHRDIKSSNILLDYNFQSKVADFGLSRIGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFARARSEINLAALAVDRIRRGLVDEIIDPYLEPHRDAWTLYSVHKVAELAFRCLAFHSDMRPTMMEVAEELEHIRRSGWTTMEETIYMASPAVSACSSPRNRSQKSMNSVHFERGGQESEAFSVVPLEEVRESSPVSVHVAWLSGPSSPSTNSLLGNVVQ 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00851 691 Gene3D Laminin 208 242 - -
Aip01g00851 691 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Aip01g00851 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Aip01g00851 691 Pfam Protein kinase domain 331 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00851 691 ProSiteProfiles Protein kinase domain profile. 330 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00851 691 Gene3D Phosphorylase Kinase; domain 1 290 405 - -
Aip01g00851 691 Gene3D Transferase(Phosphotransferase) domain 1 406 621 - -
Aip01g00851 691 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 23 642 - -
Aip01g00851 691 SMART serkin_6 330 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00851 691 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 642 IPR045274 GO:0007166
Aip01g00851 691 SUPERFAMILY Protein kinase-like (PK-like) 312 603 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00851 Aip-Chr1 15345770 15350835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00851 7 689 Receptor kinase-like Gene Family AT2G23450 54.000 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aip01g00851 Pkinase 6.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00851 - - gmx:100810861 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00715 05 9052239 9059160 Aip01g00851 01 15345770 15350835 PCT