Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00813 ATGGTAACCGCCAATGACTCAGATCGAGTCTCCATTTGGAACTGTGAACACCGACAGATTGTAAATGGCCCTGAAGTTTTGAGCAAATTTGTTGGGGATGAAAGTGATTTGCATGTAATTATCTTTGATGAAATCAATGCTATTTATAAGTCAAGAGGTTCAACTCGCGATGGTACTGGAGTTCATGATAGAATTGTGAACCAACTTCTTACTAAGATAGATAGTGTGGAGTCACTAAATAATGTTTTGCTTATTGGAATGACCAACAGAAAGGATATGCTTGATGAGGCTCTCTTAAGACCAGGGCGGTTGGAAGTCCAGGTTGAGATAAGCCTTCCTGATGAAAATGGTCGATTGCAAATTCTTCAAATTCATACTAACAAGATGAAAGAAAATTCTTTTCTTGCTCCTGATGTGAATCTTCAAGAGCTTGCTGCTAGAACAAAAAACTACAGTGGTGCAGAACTTAAAGGTGTTGTGAAAAGTGCCGTCTCATATGCTTTAAGTCGACAACTGAGTCTAGAGGATCTCACGAAGCAAGTTGAGGAAGAGAATATTAAGGTTACCGAATTCTGGAACAGCAACTTCAAAAACACATATCTCAAGACTCTGAAACTCTTTGGAGGTGCAACCAAAGAGGGGTGA 645 0.3953 MVTANDSDRVSIWNCEHRQIVNGPEVLSKFVGDESDLHVIIFDEINAIYKSRGSTRDGTGVHDRIVNQLLTKIDSVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLAPDVNLQELAARTKNYSGAELKGVVKSAVSYALSRQLSLEDLTKQVEEENIKVTEFWNSNFKNTYLKTLKLFGGATKEG 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00813 214 Gene3D - 17 112 IPR027417 -
Aip01g00813 214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 174 IPR027417 -
Aip01g00813 214 Gene3D - 113 200 - -
Aip01g00813 214 Pfam ATPase family associated with various cellular activities (AAA) 36 111 IPR003959 GO:0005524|GO:0016887
Aip01g00813 214 Pfam AAA+ lid domain 138 184 IPR041569 -
Aip01g00813 214 PANTHER VESICULAR-FUSION PROTEIN NSF 14 190 IPR039812 GO:0016887|GO:0035494
Aip01g00813 214 CDD AAA 20 112 - -
Aip01g00813 214 ProSitePatterns AAA-protein family signature. 82 100 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00813 Aip-Chr1 14299156 14301627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00813 21 190 Calmodulin-binding Proteins AT3G56690 27.869 9.39e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00813 K06027 - gmx:100791847 303.138