Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00782 ATGTCAGCCACAGCACCCGAGGCCCGTCAATGGCACTGGGAGAATGCTGCTGCCGGTGGCACAGCTGGGTTTGCCACTGTTGCTGTTATGCATCCCCTCGATGTTGTCCGCACTAGATTCCAAGTTAATGATGGCAGAGTCTCTCATGTTCCCAATTATAAGAATACTGTTCATGCAATTTTCACCATTGCTCGATCTGAGGGATTAAGAGGATTATATGCAGGTTTTCTTCCTGGTGTTATTGGGTCTACTATTTCATGGGGCCTATATTTCTTTTTTTATGATAAAGCCAAACAAAGATATGCTAGGAATAGGGAGGATACACTGAGCCCAGGTCTTCATCTTGCCTCAGCTGCTGAAGCAGGAGGTTTGGTGTGCTTGTGCACAAATCCTGTTTGGCTGGTAAAAACAAGATTGCAGCTTCAGACTCCTCTTCATCAAACACGACCATACTATGGGATTTTTGATGCATTTAGGACCATAATGAGGGAAGAAGGTTTTAGAGCACTCTACAGAGGAATTGTTCCTGGTCTATTTCTGGTCTCTCATGGGGCTGTTCAGTTCACAGCATACGAGGAACTTCGTAAAGTTATTGTAGATATAAAGCACAGGGGAAGTAAAAGGCATTGTCAAAACCCGGATGATCTGTTGAATTCTGCTGATTATGCTGTTCTTGGAGCAACATCAAAAATTGCTGCAATACTTCTAACCTATCCATTTCAGGTACAGTTTCTTCAACGGCCTAGTGCGGATGGGGTTCCAAGATATGTGGATAGTTGGCATGTTGTGAAGGAAACTGCAAGATATGAAGGTGTCCGAGGATTTTACAGGGGAATAACCCCAAGCCTTTTGAAAAATGTTCCTGCTTCTTCAGTAACATTTATTGTTTATGAAAATGTTCTTAAATTGCTTAAACTAGCAAGGAGGAATGACTAA 936 0.4274 MSATAPEARQWHWENAAAGGTAGFATVAVMHPLDVVRTRFQVNDGRVSHVPNYKNTVHAIFTIARSEGLRGLYAGFLPGVIGSTISWGLYFFFYDKAKQRYARNREDTLSPGLHLASAAEAGGLVCLCTNPVWLVKTRLQLQTPLHQTRPYYGIFDAFRTIMREEGFRALYRGIVPGLFLVSHGAVQFTAYEELRKVIVDIKHRGSKRHCQNPDDLLNSADYAVLGATSKIAAILLTYPFQVQFLQRPSADGVPRYVDSWHVVKETARYEGVRGFYRGITPSLLKNVPASSVTFIVYENVLKLLKLARRND 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00782 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Aip01g00782 311 Pfam Mitochondrial carrier protein 221 305 IPR018108 -
Aip01g00782 311 Pfam Mitochondrial carrier protein 11 104 IPR018108 -
Aip01g00782 311 Pfam Mitochondrial carrier protein 109 199 IPR018108 -
Aip01g00782 311 Gene3D Mitochondrial carrier domain 2 105 IPR023395 -
Aip01g00782 311 Gene3D Mitochondrial carrier domain 106 310 IPR023395 -
Aip01g00782 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Aip01g00782 311 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 306 IPR044712 GO:0006862|GO:0055085
Aip01g00782 311 SUPERFAMILY Mitochondrial carrier 13 299 IPR023395 -
Aip01g00782 311 PANTHER BNAA09G07970D PROTEIN 10 306 - -
Aip01g00782 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 303 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00782 Aip-Chr1 13726725 13733184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00782 32 304 Chloroplast and Mitochondria Gene Families AT2G47490 38.267 1.73e-46 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00782 K15115 - gmx:100809599 522.316