Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00778 ATGAATGAGCAATACCAGGAGGACGATGATAATAACCAACAAGAAGAGCTAGTTTGTGACCAGAATATGATGGATGAACATAATGAATTCGAACAAGATTTCGGAGATGAATTTACTGAGGGAGCATATTTTTCTGAAGCTGATCGGTCAGAAGATATCCTTGAAGCTGCTTATGCGGTTGACTCCGTGCAAGACATTACAACTTTGAATTTTAGTGAAAATTTTGCGGAAGAAATTGGTAAAGATCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATCTGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGAAAGAGCAAGACCTTTAAGAATAGTATTGGCGAGATTTACAAACAAAAATTTGTATGTTATAGGCAAGGATTCAGGGAGGAGAAATATTACACGATGGAAAAAAGGAAGAAAGAGCCTAGATTGAAAACAAGAACTGGGTGTGAAGCCCGAATGGATGTTAAATTTGTACCAGAAACTGGAAGGTGGCATATCTTTTATTTCTCTGACGAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTACCCACAGAAAAATGTCAGAGGCAGATATTATGCAAATGATGAACATGCTAAAGTCCGGGATTAGTACTTCACAGATATTTCGTCTTCTAGCTAGTCAAGCAGGCGGGTATGAATTTGTTGGCTATGGTCCCAGAGATATGTACAATGAGATTGCTCGGCAAAGGCGTCAAATTCCTGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCGCAATTATATTTCAAGGCATTGATTCAAGAGGTTTATTACGTAACTTGTTCTGGTCTGATGGGATTAGCCAACTAG 879 0.3914 MNEQYQEDDDNNQQEELVCDQNMMDEHNEFEQDFGDEFTEGAYFSEADRSEDILEAAYAVDSVQDITTLNFSENFAEEIGKDHFSTLQLAFDFYLKYSKSKGFSARKSKTFKNSIGEIYKQKFVCYRQGFREEKYYTMEKRKKEPRLKTRTGCEARMDVKFVPETGRWHIFYFSDEHNHDLLDTQFSAMLPTHRKMSEADIMQMMNMLKSGISTSQIFRLLASQAGGYEFVGYGPRDMYNEIARQRRQIPGDAARVLKKLEDMRLKDPQLYFKALIQEVYYVTCSGLMGLAN 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00778 292 Pfam FAR1 DNA-binding domain 92 182 IPR004330 -
Aip01g00778 292 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 23 258 - -
Aip01g00778 292 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 23 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00778 Aip-Chr1 13589614 13590492 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g00778 FAR1 6.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00778 - - aip:107633123 490.73