Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00777 ATGTTGGAAGATTACGAGATTCCCGTGTTTAAGCGTAAGTGGGTTCAACTTATTGAAGAATTTGGCCTTGAGGATAAGTCGTGGGTGAACAACATGTATGAAGAGAAGCATATGTGGGTTACTGCATATATAAGAGGAAAATTCTTTGCTGGGTTTAGAACTACCTCAAGATGTGAAGGTTTACACTCAGTTGTGGCAAGGTATGTGGGGTCGCGGTATGATTTGACAAGTTTTGTAGAGCATTTTCAAAGGTGTGTTGCACACTTGCGCTTTAAAGAATTTAATGCTGATTATGAATCTACACGTGGGGTGCCCGTCATGCAGACTTGTATAGAGCTGCTAGAGAGATTTGCTGCTAAGTTATACACTCATGAGATATTTCTATTGTTTCGGCCATTTCTCTCTAGAGCTAGATCAATGTGGGTGCTAAACATAGAGAATAACGATGATTGCATAAAGTACATTGTGTGTAAGCATGGGAGGCCCAAATTTTTGTGGACCGTTGAATTTCGTCAAGAAGAAATGATCTTCATGTGTACCTGTTTAAGAATGGAGTCATTTGGAATTCCCTACGAACATAATGTGAAAGTTCTAGTTGACAGAGACATTTGTGAGATTTCCCAGTCATTGGTATTGGATAGATTGACAAAAAAGGTGAAATCAGCACTCAATGATCCAATACCAGAGAGATATGAAGAGACACGTGACATAATTATGGGATTGTACTCATCTTACAAGGCTGCAGACGAAGGCACTAATCAACCTCAGTCAGGTGTAGCTAAAAGTAGTAATCCGTATGTGCATCAAACCAATATAGGCTCAGAACAACCATCTAAGAAGAAGCAGCAACGTTGTAGTGTTTGTCAAATGGAAAGACATAAGAAGACAACATGTCCTTGGCAAAAGGACATTGACAACAACGTTATAGAAGATGAAGCTAATGGTTCGGATGATGGCAACATACTTTCAAGCGCAGAAATGGCAGAAGAAACAAGCATGGTCGCGGCCACGTCAAATTCATCCGCTGTTCCAACTGCGGCAAGTGCTGCCCTAAGGTACTCTCCTTCTTTCTCCATTCATATTTGTTTCTCACTCCTCTTAGAATACACTCTTCCGAAGTTGTACGTGAAGATGCAGTATTGTGTTTCCTGTGCCATCCACTCTCATGTCGTGAGGGTGCGTTCTCGCACCGATAGGAAGAACCGCGAGCCGCCACAGCGCTTTGCTAGGCGTAGAGATGATGCACCAAGGCCCGGTCAGCCTGGTCAAGCACCTCGTCCTACTGGTGGATTAGGAGCTACCCCTCGATATATTGGAGGCTGA 1323 0.4293 MLEDYEIPVFKRKWVQLIEEFGLEDKSWVNNMYEEKHMWVTAYIRGKFFAGFRTTSRCEGLHSVVARYVGSRYDLTSFVEHFQRCVAHLRFKEFNADYESTRGVPVMQTCIELLERFAAKLYTHEIFLLFRPFLSRARSMWVLNIENNDDCIKYIVCKHGRPKFLWTVEFRQEEMIFMCTCLRMESFGIPYEHNVKVLVDRDICEISQSLVLDRLTKKVKSALNDPIPERYEETRDIIMGLYSSYKAADEGTNQPQSGVAKSSNPYVHQTNIGSEQPSKKKQQRCSVCQMERHKKTTCPWQKDIDNNVIEDEANGSDDGNILSSAEMAEETSMVAATSNSSAVPTAASAALRYSPSFSIHICFSLLLEYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRKNREPPQRFARRRDDAPRPGQPGQAPRPTGGLGATPRYIGG 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00777 440 MobiDBLite consensus disorder prediction 396 417 - -
Aip01g00777 440 Gene3D Ribosomal protein S26e 362 421 IPR038551 -
Aip01g00777 440 PANTHER 40S RIBOSOMAL PROTEIN S26 368 433 IPR000892 GO:0003735|GO:0005840|GO:0006412
Aip01g00777 440 Pfam Ribosomal protein S26e 366 413 IPR000892 GO:0003735|GO:0005840|GO:0006412
Aip01g00777 440 MobiDBLite consensus disorder prediction 393 440 - -
Aip01g00777 440 PANTHER 40S RIBOSOMAL PROTEIN S26 368 433 - -
Aip01g00777 440 ProSitePatterns Ribosomal protein S26e signature. 380 387 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00777 Aip-Chr1 13585784 13589257 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00777 364 423 Cytoplasmic Ribosomal Protein Gene Family AT2G40510 75.000 1.49e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00777 - - aip:107620889 577.785