Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00765 ATGGCGGGGTTGTTCTCGTTAGGAGGCGGTGGTGGTGGAGGAGGAGGAGGAGGAGGAGGAAGAGGTAGCAGCGGAAACCACCAGGACCAGGAACAGCAACACCAGCACCACAGTCAAAACACCGAAATTCCTCCTCCAGAGACCTTATTTTGGTACAAACAAAACGACGACGTTTCAACATACCGCGGTTTCGAGCTATGGAACCAGCATCAGCTTCAGCAGCAACAGCAGCAACATCACGTGATAGCACATCACCATCAAGCCCGCCCTCTCTTCCACCGAGATCTCTACTCGTCGGCTGTTGCCCTTGGCGTGGGGCCCAGCGGCGCGTCCGATGAGCAGTCTCCGTCGAGATCGGCGGTTATGGCGATGCGGTCCGCCGGGGTGGGAGAAGCCGGAGGAGCAGGAAGCGGAACAACCGGAATAAGCTGTCAAGATTGCGGAAACCAGGCGAAGAAAGACTGCCCTCACATGAGGTGCAGGACTTGTTGCAAGAGTCGTGGGTACGACTGCCAGACCCACGTGAAGAGCACGTGGGTCCCAGCCGCTAAGCGCCGCGAGCGGCAACAGCAGTTAGCGGCGCTTCAGGATCACCAGAACAGAGATGCTTCAAAGAGACCTAGAGATGGCGGTAATAGCAACAACCCTTCCACTTCTTCAGCACTTGTTTGCACTACTCGTTTGCCCTCCACTGGGTTAGAGCTTGAGCAAGGAAATTTTCCATCAATAGTGAACTCTCCTGCAGAGTTCAGGTGCGTGAGGGTTAGTCCCTTGGATGATGTGAATGAACAGTACGCTTATCAAACCGCCGTCAACATCGGAGGCCATTTGTTCAAAGGGATTCTCTATGACTACGGTCCGGACAGCGAAAATGCTAGCTACTACGGTGGTGGCAGCGGAGGCGGCGAGGGTTCTTCTTCCGCTATTGCTGGAGCTCAGCCCTTGAACCTCATCACCGGCACTGATTCTGCCACCACCGCAACCGCAACCGCCCCGGGTGTGTCGTCTGCAGAGGCTCTTGATGTTGATCCTTCGTCGTTGTACAATCCAGCTCCAATTAATACATACATGGCTGGTAGTAGCGGTACGCAATTCTTCCCTCATCATCCAAGATCTTGA 1119 0.5487 MAGLFSLGGGGGGGGGGGGGRGSSGNHQDQEQQHQHHSQNTEIPPPETLFWYKQNDDVSTYRGFELWNQHQLQQQQQQHHVIAHHHQARPLFHRDLYSSAVALGVGPSGASDEQSPSRSAVMAMRSAGVGEAGGAGSGTTGISCQDCGNQAKKDCPHMRCRTCCKSRGYDCQTHVKSTWVPAAKRRERQQQLAALQDHQNRDASKRPRDGGNSNNPSTSSALVCTTRLPSTGLELEQGNFPSIVNSPAEFRCVRVSPLDDVNEQYAYQTAVNIGGHLFKGILYDYGPDSENASYYGGGSGGGEGSSSAIAGAQPLNLITGTDSATTATATAPGVSSAEALDVDPSSLYNPAPINTYMAGSSGTQFFPHHPRS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00765 372 Pfam Domain of unknown function (DUF702) 141 288 - -
Aip01g00765 372 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 33 368 IPR007818 GO:0003700|GO:0006355
Aip01g00765 372 MobiDBLite consensus disorder prediction 182 222 - -
Aip01g00765 372 MobiDBLite consensus disorder prediction 1 47 - -
Aip01g00765 372 PANTHER TRANSCRIPTION FACTOR STY-LRP1 FAMILY-RELATED 33 368 - -
Aip01g00765 372 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 240 287 IPR006511 -
Aip01g00765 372 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 143 185 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00765 Aip-Chr1 13184684 13186895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00765 1 372 C2H2 Transcription Factor Family AT3G51060 47.654 1.05e-82 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Aip01g00765 DUF702 3.6e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00765 - - ahf:112720334 646.351