Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00762 ATGTGCCTAAATTCCTGCAGAGGTGCAAGGCATGTTCTTTACAGGTTTGCCAATGAAGATGTCTCACTAGGCTCATGGTTTATTGGACTTGAAGTGGATCATATTGATGATAGGAGACTCTGCTGTGGCACTCCACCAGAAGATTTCTCGTATTCTAATAAACTAGGAGAAGGTGGATTTGGATCTGTTTATAAGAGTAAGCTCTCCAATGGACAAATGATTGCTGTGAAGAGGTTATCGAAGGACTCGGGCCAAAGAGATATGGAATTCAGGAATGAAGTGCAGTTATTAGCTGAGCTTTAA 303 0.4158 MCLNSCRGARHVLYRFANEDVSLGSWFIGLEVDHIDDRRLCCGTPPEDFSYSNKLGEGGFGSVYKSKLSNGQMIAVKRLSKDSGQRDMEFRNEVQLLAEL 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00762 100 ProSiteProfiles Protein kinase domain profile. 49 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00762 100 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 47 100 - -
Aip01g00762 100 ProSitePatterns Protein kinases ATP-binding region signature. 55 77 IPR017441 GO:0005524
Aip01g00762 100 SUPERFAMILY Protein kinase-like (PK-like) 41 100 IPR011009 -
Aip01g00762 100 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 47 100 - -
Aip01g00762 100 Gene3D Phosphorylase Kinase; domain 1 44 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00762 Aip-Chr1 13106213 13106978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00762 44 100 Receptor kinase-like Gene Family AT4G04510 63.158 2.86e-18 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip01g00762 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00762 - K20855 gmx:102668005 85.8853