Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00758 ATGAGCATCAACGAAGCAAATCACTACTTTCATCTCACAGTCTCTTTCTCGAAACCCTACTTTGTCCTCCGTATCGACTTAGCTGCTAAGGTAATTGCCACTGTCAAGGATGCATGTAGAGCGGCTGTGCTTCAGAATAAACCCCGGCTTGTGGAAGCAATGTACTTCTGTGAATTGAATACACCTACTGAATGTGTGGGTCCAATGTATGCTGTACTCAACCGAAGACAGGCCCGAGTTCTGAAAGAAGAGATGCAGGAAGGTTCCCCTTTCTTCACTGTGCATGCGTATGTTCCAGTTTCTGAGAGCTTTGGTTTTGCGGATGAGCTCAGGAAAGGGACTTCCCGTGCTGCAAGTGCGCTTCTTGTCCTTAGCCACTGGGAAGCACTTCCGGAGGATCCATTCATTGTACCCAGAACGGAGGAGGAAATTGAAGAGTTTGGAGATAGTTCTAGTGTTCTTCCAAATACAGCTAGAAAGTTAATTAACACAGTAAGATGGCACAAGGGCCTTCCTGTGGAAGAAAAAGTTGTACAACATGGAACCAAGCAGAGGACGCTGGCTCAGAGAAAGGAGAACTTTCGTTGTGTCCTTTCTTTTCCAACCCTTACAAAATCTTTGCTTCCACTACCTGACAAATATGATAGAATAACTGATATAGATAAACGCTATGTCCAAAGGAAATCAATATTATCTCCCGTACTGAAAGAACTTAAATCTACTGGAGAAGACAAGAATATGGAGAGAGCACAGGCAGGAAAAAGAAATACCTTGTATTATAATAGTTCCTTTAGTTTTTCAGATTCTTATATGGTATCTGCCTTTATTATTTATGATGGTAGAGGAAGGATGCTAAAACCTGAGGTGGTAGATGGCGTTATTGGCGAGAATCCTGCACCGAGTTTGCAAGAGGATTTGGAGGCTAATAATTTGGAAGGAAATAAAGTTGAGGAGGCTTGCATGCATGATGAACCAGGCTGGGAGAAAGTTGTGAGGAAAGCCGTGAAGGAGGGTGTTACCGTGGTGGTTCCATTGGAGAAGGAAGTCGCGTTGCCGGCTGTTGCTGCATCGGTAGGCGGGAATAAGGAGATATTCCATggagatccggcaaacatgaaggtcacgagagtcacttccgctgggcaagcctcggtttga 1158 0.418 MSINEANHYFHLTVSFSKPYFVLRIDLAAKVIATVKDACRAAVLQNKPRLVEAMYFCELNTPTECVGPMYAVLNRRQARVLKEEMQEGSPFFTVHAYVPVSESFGFADELRKGTSRAASALLVLSHWEALPEDPFIVPRTEEEIEEFGDSSSVLPNTARKLINTVRWHKGLPVEEKVVQHGTKQRTLAQRKENFRCVLSFPTLTKSLLPLPDKYDRITDIDKRYVQRKSILSPVLKELKSTGEDKNMERAQAGKRNTLYYNSSFSFSDSYMVSAFIIYDGRGRMLKPEVVDGVIGENPAPSLQEDLEANNLEGNKVEEACMHDEPGWEKVVRKAVKEGVTVVVPLEKEVALPAVAASVGGNKEIFHGDPANMKVTRVTSAGQASV 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00758 385 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 26 190 - -
Aip01g00758 385 CDD eEF2_snRNP_like_C 52 131 - -
Aip01g00758 385 PANTHER - 26 190 - -
Aip01g00758 385 SMART EFG_C_a 49 138 IPR000640 -
Aip01g00758 385 Pfam Elongation factor G C-terminus 50 134 IPR000640 -
Aip01g00758 385 Gene3D - 48 183 - -
Aip01g00758 385 SUPERFAMILY EF-G C-terminal domain-like 52 152 IPR035647 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00758 Aip-Chr1 12982752 12991038 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00758 27 190 Eukaryotic Initiation Factors Gene Family AT3G22980 78.049 1.49e-81 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00758 K14536 - gmx:100775257 289.271