Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00746 ATGAAGAACACTTTTGCTCTTTGTTCTTATTTACTCCTCCTTGTTACCCTTTTGGGTCTAGTATTCTCAAATTGCAAAGCCAACCAAGTTGATAACCTTGATGAGTTGATTAATTCAAGAAGCTCAGAGAATCCTCCTAAGACTCTTTCTTGGACAAAAGAAGATGCATACATACCAAAATATTATTATACTTCTTCTATTGATCCATCTCCATCACAAGAGGAGCAAAAGTTGGCTGATAAAATAACTGCATTGCCAGGTCAACCATATTATGGGTCAAATTTTGACCAATATGCAGGGTATGTTACTGTTGATCCAAATGCTGGGAGAGATCTTTTCTATTATTTTGTGGAGTCTCCAGCTAATTTCTCTCAGTACAACCCTTTGGTTTTGTGGCTCAATGGAGGACCTGGTTGCTCCTCACTGGGTTTCGGTGCATTTGAGGAGTTGGGACCCTTCAGAGTCAACCCTGATGGTCAAACCCTATACCGCAACCAATTTTCCTGGAACGAAGTGGCTAATGTTCTGTTCTTGGAATCCCCTGCTGGAGTGGGATTCTCGTACGCACAAAATGATTCACAAACATTTTTCCATACTTCCGGTGACAAGGCTGCTGCAAAGGATGCCTACGTGTTCCTGGTTAACTGGCTAGACCGGTTTCCAGAGTACAAAGACCGTGAAATTTACATCACTGGCGAGAGCTATGCCGGTCACTATGTGCCTCAGCTTGCATATACTATTGTTGTCAACAATCTTTTCAGACAAATTGCCAACCAATCTGCTATCAACCTTCAAGGCATTGCTATAGGGAACCCATGGGTTGATGATTTTACTGGTGTAAAGGGGTTATTTGATTACCTCTGGACTCATGCTTTGAACTCAGACCAAACTCATGAGCTCATTGAGAGATACTGTGACTTCAAATCCCAATCCGTTTCCTCTATTTGTATCAATGCAACAAGAAATGCCTTCGCTGAGAAAGGACCCATTGACTCCTATAATATATACGCACCACTGTGTCACGACACCTCTCTCAAATCTTCTCAAACTGGTTCTGTATACAATTACGACCCATGCTCTAATGTGTACGTGCAAGCCTATCTAAATAGGCCAGAGGTCCAACAAGCTCTTCATGCAAAACCCACACAATGGAGCCACTGCAGTTTGTTTCAGTGGAAGGACAGCCCAGTTACAGTCCTACCCCTCATCAAGAAGCTCATCGACCACAATATTAATGTCTGGATATACAGGCAAGTTCAATATTCAAGAGTGTCAGTCACAGCTACCAGATATGCACTCAACGTCCTCAAGCTCCCTATTGTGACCCCTTGGTATCCATGGTATTCTGAAAACGAGATTGGAGGATATGCGGTGCAATACAAAGGATTGGCATTTGCGACAGTGAGAGGAGCAGGGCATATGGTTCCAAGCTGGCAGCCAGAACGGGCTTTCAACTTGATCTTAGCATTCCTCAGTGGATATCCCTCCCCTCCTAGTTCACCAAAATGA 1509 0.4334 MKNTFALCSYLLLLVTLLGLVFSNCKANQVDNLDELINSRSSENPPKTLSWTKEDAYIPKYYYTSSIDPSPSQEEQKLADKITALPGQPYYGSNFDQYAGYVTVDPNAGRDLFYYFVESPANFSQYNPLVLWLNGGPGCSSLGFGAFEELGPFRVNPDGQTLYRNQFSWNEVANVLFLESPAGVGFSYAQNDSQTFFHTSGDKAAAKDAYVFLVNWLDRFPEYKDREIYITGESYAGHYVPQLAYTIVVNNLFRQIANQSAINLQGIAIGNPWVDDFTGVKGLFDYLWTHALNSDQTHELIERYCDFKSQSVSSICINATRNAFAEKGPIDSYNIYAPLCHDTSLKSSQTGSVYNYDPCSNVYVQAYLNRPEVQQALHAKPTQWSHCSLFQWKDSPVTVLPLIKKLIDHNINVWIYRQVQYSRVSVTATRYALNVLKLPIVTPWYPWYSENEIGGYAVQYKGLAFATVRGAGHMVPSWQPERAFNLILAFLSGYPSPPSSPK 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00746 502 ProSitePatterns Serine carboxypeptidases, histidine active site. 463 480 IPR033124 GO:0004185
Aip01g00746 502 Pfam Serine carboxypeptidase 93 492 IPR001563 GO:0004185|GO:0006508
Aip01g00746 502 Gene3D - 359 389 - -
Aip01g00746 502 ProSitePatterns Serine carboxypeptidases, serine active site. 230 237 IPR018202 GO:0004185
Aip01g00746 502 Gene3D - 399 493 - -
Aip01g00746 502 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 22 496 IPR001563 GO:0004185|GO:0006508
Aip01g00746 502 PANTHER CARBOXYPEPTIDASE 22 496 - -
Aip01g00746 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 177 IPR001563 GO:0004185|GO:0006508
Aip01g00746 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 178 188 IPR001563 GO:0004185|GO:0006508
Aip01g00746 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 463 476 IPR001563 GO:0004185|GO:0006508
Aip01g00746 502 PRINTS Carboxypeptidase C serine protease (S10) family signature 216 241 IPR001563 GO:0004185|GO:0006508
Aip01g00746 502 Gene3D alpha/beta hydrolase 77 342 IPR029058 -
Aip01g00746 502 SUPERFAMILY alpha/beta-Hydrolases 80 496 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00746 Aip-Chr1 12758096 12762610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00746 367 495 Calmodulin-binding Proteins AT2G22960 28.058 9.51e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00746 K16297 - gmx:100779407 668.307