Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00742 ATGGATTCTGAAAACTATGATTTGGATGAGTTTTTGGCTTCCATTTCTTTTGATTGTTTATATGATTCGAACCCCAACAACCCTTCAGTTTCCATATATGAATTGGATTCTTTGCATGAACCTCAATTGTCACTGTCAGATATGGATCATAATAATGGTTTGGTTTTGAAGTGTAACGGTTCTACGAAATGCTTCACTGACCAAGACCCATTTTTTGATCCATTGGAGGAACAAGTGTTATATGAATCAGCATTGACCTCATTGTGCATAACGAACAACTCAATGGAAAATCAACATTCTAATCAAGTGATTATGGCAGAAGCTGATTTTCCATCAAGTTCTGAGGTATCCAAGAATTTGTTAGAGCCAATTGATGTGTCAGAAGAGTTCTTGAACTTCACTTCAGTGGACGATATTTGCCAATGGTTTGATCCTTCACAAGAGGATAATAACTCAAACACCTTTTTAGAACCAATGCAATGTGATGCTACTTCTTTTTCTTGGAAATCAGTTATGGATAGCTATGAGAATTGTCTATTGGGAAGCAAGGAACCCGAGTCGAATTTGATCGCACCGGCGGCGAGTTCTGCTGATGATACTACCATCTTTGAATGCCTATCAGAGTTTGATTTTGATGTGCCGACAATGTTATTCTCAGATTCATCAATTGAGGAGCTTTTGAATTGTGAAGAAGCAATTTGCAACAACCCTTTGAATAATGGTTCTAGTTCTGTTTTGGAGTTATCATCAGAAAACAATAAAATGGAGATGATGGAGAACATTTCAAATCCAATGAACTTCACAAAAAATCTTGCTTGGTTTGAGGCTAGAAACAACTTGACCCAGCCGGTTCCGGATTTGGACACAACAAACAAAATCAAGAGAAAGAAAGTGCAGCTAGGCTTGGTTATGGATGATAGTCATAGCATTAAGCTTGGGGAGACCATTCTTGTGCCGCCTCGGAAGAAAGAGGAGCCAAAAAAACCTAGCAAGAAGAAGGACAAGGCAGGGGTGGGTAGTCGGCCGCGGCCAAAAGATCGCCAGAGGATTCAAGACTGCATTCGACAATTGAGAACAATCATCCCTGGCAAGAATGTTAAAGAGTGTAGCATTGATAATTTGTTAGAGTGCTCCATCAGATACATGAGTTTCTTGTCAAGCACTGCACATTATGCAAACAAGCTACAAGAACCAGATAAGCCTAAGCTTATTGAGCAGGCAAATGGAGTGGTTCTACAAGAGAGTAGTGTGGAAGGTAGCAAATATTGTGGAACATGGTCATTTGAAGAGCCACATCAAACATTGTTATGCCCAATTATAGTTGAGGACATGTCTCATCCTGGCCAAATGCTTATAGAGTTGCTCTGTGAGGAGGAAGGGTTCTCTCTTGAGATGGTTGACACAATTAAGGGTCTTGGTTTAAATATCCTGAAAGCAAAGATGGAAACAAGGAATAAAAAACTATGGGCACGCTTTATTGTTGAGGCCAATAGACATGTTACAAAAATAGATGTGTTTTGGTCCCTTCTCCATCTTGTAGAGCAGAAAAACTCCTCAGGAACTGGAATGGATTCATCAACTAATAATAACAAGTATTGCAATGTAATGAATGATAGCAGTGTTTCAAGATTGGACAAACAACAACAAGAGAAAGAGAGTTGCAACCTTTTTATGTCCAGGACAGAGTAA 1689 0.3925 MDSENYDLDEFLASISFDCLYDSNPNNPSVSIYELDSLHEPQLSLSDMDHNNGLVLKCNGSTKCFTDQDPFFDPLEEQVLYESALTSLCITNNSMENQHSNQVIMAEADFPSSSEVSKNLLEPIDVSEEFLNFTSVDDICQWFDPSQEDNNSNTFLEPMQCDATSFSWKSVMDSYENCLLGSKEPESNLIAPAASSADDTTIFECLSEFDFDVPTMLFSDSSIEELLNCEEAICNNPLNNGSSSVLELSSENNKMEMMENISNPMNFTKNLAWFEARNNLTQPVPDLDTTNKIKRKKVQLGLVMDDSHSIKLGETILVPPRKKEEPKKPSKKKDKAGVGSRPRPKDRQRIQDCIRQLRTIIPGKNVKECSIDNLLECSIRYMSFLSSTAHYANKLQEPDKPKLIEQANGVVLQESSVEGSKYCGTWSFEEPHQTLLCPIIVEDMSHPGQMLIELLCEEEGFSLEMVDTIKGLGLNILKAKMETRNKKLWARFIVEANRHVTKIDVFWSLLHLVEQKNSSGTGMDSSTNNNKYCNVMNDSSVSRLDKQQQEKESCNLFMSRTE 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00742 562 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 334 385 IPR011598 GO:0046983
Aip01g00742 562 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 94 550 - -
Aip01g00742 562 MobiDBLite consensus disorder prediction 313 349 - -
Aip01g00742 562 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 94 550 IPR043561 GO:0003700|GO:0006355
Aip01g00742 562 MobiDBLite consensus disorder prediction 541 562 - -
Aip01g00742 562 MobiDBLite consensus disorder prediction 317 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00742 Aip-Chr1 12644821 12647081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00742 299 520 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 40.444 1.36e-45 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00742 - - adu:110281254 989.949