Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00741 ATGGATGTGTATATCTATGATTATCTGATGAAGAGACAGTTGCATGCTTCTGCCAGGGCATTCCAGGCCGAAGAAAATGTGTCGACCGACCCTGTTGCAATAGATGTGCCTAGTGGTTTTCTCTTCGAGTGGTGGTCTGTTTTCTGGGACATATATATTGCAAGGACCGATAAAAAATACTCAGAAGCAGCAGCAATTTATAGCAAGATAGAAGTGAAGAAGCATATGCGGTGTGCCAGACCCAACAAAGTAAGGCTCGAGAACTGCAAAAAATCAAGAGCAAGAGCTTCAGAATCCAAATCAGAGACAAATGCAGCTCTATATGCAGAGATATGCTCAGCAGCAGGAACAAGAGCAGCAGTTATAGGAGCAACAGCAGCAGCAGCTTAG 390 0.441 MDVYIYDYLMKRQLHASARAFQAEENVSTDPVAIDVPSGFLFEWWSVFWDIYIARTDKKYSEAAAIYSKIEVKKHMRCARPNKVRLENCKKSRARASESKSETNAALYAEICSAAGTRAAVIGATAAAA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00741 129 ProSiteProfiles LIS1 homology (LisH) motif profile. 1 29 IPR006594 GO:0005515
Aip01g00741 129 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 1 86 IPR044716 GO:0003714
Aip01g00741 129 Pfam LisH 1 24 IPR006594 GO:0005515
Aip01g00741 129 PANTHER LISH-SSDP-WD40 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00741 Aip-Chr1 12618867 12619415 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Aip01g00741 LisH 1.4e-06 CL0561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00741 - - fve:101290798 122.864