Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00740 ATGGATTACTTACTTCAACATGAACCAATAATGCGAATGGCTCTACTGTTCGCCATCCCACTTTTACTTCTTCTGCCTTTGGTGTCACGAAAACTTCGTCAAACGACACCGTTTCCGCCAGGGCCAAAGGGGTTGCCAATCATTGGAAACATGAACATCATGGACCAACTTACACACCGAGGTCTTGCCAACCTGGCAAAACAATACGGCGGCGTTTTGCACCTCCGCATGGGGTTCCTCCACATGGTTGCGATTTCGAACCCGGAGGCAGCACGCCAAGTACTCCAGGTGCACGATAATATCTTCTCCAACCGCCCTGCCACCATAGCCATCAGTTACCTTTCTTACGACCGTGCTGACATGGCTTTCGCTCACTACGGCCCCTTCTGGCGTCAGATGCGTAAGCTCTGCGTCATGAAGTTATTTAGCCGTAGACGAGCGGAGTCATGGCAGTCCGTAAGAGACGAGGTTGATACGGCGGTTAAAACCGTAAGTAAAAACCTCGGGAAGTCCGTGAACATTGGTGAGCTTGTGTTTAACCTCACCAAAAATATTATTTATAGGGCCGCGTTCGGGTCTAGTTCGCAAGAAGGTCAAGATGAGTTCATTTCTATATTACAAGAGTTTTCTAAGCTCTTTGGAGCTTTTAACCTTGCGGATTTCATTCCATATCTGGGATGGATTGATCCGCAAGGAATTAACGCCCGGCTCGTCAAAGCGCGCGGGGCCTTGGATAGATTCATAGACAAGATCATTGATGAACATGTGGAGAAAAACAGGAAAAAGGGTCACGGCAAGGTTGATGAAGAAAGTGACATGGTTGATGAGTTGTTAGCGTTTTATGGTGAGGAGGCTAAGTTGAATAATGAATCTGATGATTTGCAGAACTCCATCAGACTAACAAAGGAGAATATCAAAGCCATAATCATGGACGTGATGTTCGGAGGCACGGAAACGGTGGCATCGGCGATAGAATGGGCGATGGCAGAACTCATTAGGAACCCAAATGAGCTGAAGCGCGTGCAACAAGAACTCGCCACCGTCGTTGGCCTCGACCGGCGCGTGGAGGAGGCAGACTTCGAGAAGCTTCCCTACCTGAAATGCGTGATCAAAGAAACCTTGCGCCTCCACCCGCCAATCCCCCTCCTCCTCCACGAGACAGCGGAGGATGCAACGGTGTCCGGATACTTCGTCCCGAAAGGGTCGCGCGTGATGATCAACGCGTGGGCAATAGGGAGGGACAAAGACTCGTGGGAAGACCCTGAAAGTTTTAGGCCTTCACGGTTCTTGGAGGAAGGAGTGGCGGATTTCAAGGGTAGTAACTTCGAGTTCATTCCATTCGGGTCGGGTCGGAGGTCGTGCCCCGGGATGCAATTGGGGCTTTATGCGTTGGAGTTGGCAGTGGCACACCTTCTCCATTGCTTCACGTGGGAGTTGCCTGATGGGATGAAGCCGAGTGAGATGGACATGAGTGATGTCTTTGGACTCACTGCTCCTCTAGCTACTCGTCTCTTTGCTGTTCCCGCTAAGCGGGTCACCTGCCCTCTCTAA 1551 0.5068 MDYLLQHEPIMRMALLFAIPLLLLLPLVSRKLRQTTPFPPGPKGLPIIGNMNIMDQLTHRGLANLAKQYGGVLHLRMGFLHMVAISNPEAARQVLQVHDNIFSNRPATIAISYLSYDRADMAFAHYGPFWRQMRKLCVMKLFSRRRAESWQSVRDEVDTAVKTVSKNLGKSVNIGELVFNLTKNIIYRAAFGSSSQEGQDEFISILQEFSKLFGAFNLADFIPYLGWIDPQGINARLVKARGALDRFIDKIIDEHVEKNRKKGHGKVDEESDMVDELLAFYGEEAKLNNESDDLQNSIRLTKENIKAIIMDVMFGGTETVASAIEWAMAELIRNPNELKRVQQELATVVGLDRRVEEADFEKLPYLKCVIKETLRLHPPIPLLLHETAEDATVSGYFVPKGSRVMINAWAIGRDKDSWEDPESFRPSRFLEEGVADFKGSNFEFIPFGSGRRSCPGMQLGLYALELAVAHLLHCFTWELPDGMKPSEMDMSDVFGLTAPLATRLFAVPAKRVTCPL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00740 516 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 12 516 - -
Aip01g00740 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Aip01g00740 516 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00740 516 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00740 516 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00740 516 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00740 516 SUPERFAMILY Cytochrome P450 39 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00740 516 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00740 516 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00740 516 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00740 516 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00740 516 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00740 516 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00740 516 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00740 516 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00740 516 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00740 516 PANTHER CYTOCHROME P450 84A1-RELATED 12 516 - -
Aip01g00740 516 Pfam Cytochrome P450 39 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00740 516 Gene3D Cytochrome P450 31 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip01g00740 516 Coils Coil 284 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00740 Aip-Chr1 12546280 12550127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00740 46 516 Monolignol Biosynthesis Gene Families AT4G36220 77.378 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00740 K09755 - gmx:100783430 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00740 01 12546280 12550127 Aip05g00875 05 12022359 12025581 PCT