Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00699 ATGTTTTCCCCATCACTCTCAACTTCCCTTCCTCCAAAACCTTACCTCTCTCACCCACTCTCCCCCTCACTCCCACTACCCACCAGACTCCACCAACCACCGTTCCCTCACTCTCGCCCTCCGTTTCCTCCTTCCATTCGCTGCGGCATTAGGGAACTCCGAGAAAGAATCGACATCGTTAAGAACACTCACAAGATCACTGAAGCAATGAAGCTCGTCGCGGCCGCCAGGGTCCGACGGGCCCAAGAAGCTGTCCTAAACGGCAGACCCTTCGCCGAAACGCTCGTTGAAGTCTTGCACGACATCAACTGCCGTCTCCGAGACGACGACGTCATCGTCCCCCTAACGGACGTCAGGCCCGTCAACTCCGTCGCCCTCGTTGTCGTCACCGGAGACCGCGGCCTCTGTGGCGGTTTCAATAACACCGTCTTGAAGAAAGCCGAAGTTCGGATCCAACAGCTACACAAGCTTGGCTTGAATTGCGTTGTGATTAGCGTTGGGAAGAAGGGGAACGCGTTTTTCAGCCGCAAGGGAAGTGTTAGGGTTGATAGGTTCGTTGAATGTGGGAGCTTCCCCACTGTGAAAGAAGCTCAAATCATTGCTGATGATGTGTATTCACTGTTTGTTACAGAGGAGGTTGACAAGGTTGAGATTGTTTACACCAAGTTTGTGTCATTGGTGAAGTTTGATCCTGTGATTCAAACTCTGTTGCCGTTAACGGCTAAAGGCGAGGTTCGCGATGTGAATGGAAACTGCATTGATGCCATTGATGACGAATACTTTAGGTTGACTACAAAGGAAGGGAAGTTGGCAGTGGAGAGGGATGTTGCTGTCAGGGAATTTGCTACGCCGCCAATTATGGAGTTCGAGCAAGATCCGGCTCAGATTCTTGATGCTATGTTGCCTCTGTATTTGAACAGCCAGATCTTGAGGGGTTTGCAGGAATCACTAGCGAGTGAGCTTGCTGCTAGGATGGCTGCAATGTCTAATGCAACCGATAATGCTATCGAATTGAAGAAGAATCTTTCGGTTGCTTATAATCGTGAACGGCAGGCAAAGATCACAGGGGAGATATTGGAGATTGTGGCCGGAGCTGAGGCACTAATACCAGTTGATTGA 1119 0.5049 MFSPSLSTSLPPKPYLSHPLSPSLPLPTRLHQPPFPHSRPPFPPSIRCGIRELRERIDIVKNTHKITEAMKLVAAARVRRAQEAVLNGRPFAETLVEVLHDINCRLRDDDVIVPLTDVRPVNSVALVVVTGDRGLCGGFNNTVLKKAEVRIQQLHKLGLNCVVISVGKKGNAFFSRKGSVRVDRFVECGSFPTVKEAQIIADDVYSLFVTEEVDKVEIVYTKFVSLVKFDPVIQTLLPLTAKGEVRDVNGNCIDAIDDEYFRLTTKEGKLAVERDVAVREFATPPIMEFEQDPAQILDAMLPLYLNSQILRGLQESLASELAARMAAMSNATDNAIELKKNLSVAYNRERQAKITGEILEIVAGAEALIPVD 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00699 372 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 50 368 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aip01g00699 372 Pfam ATP synthase 50 368 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aip01g00699 372 Gene3D - 113 241 - -
Aip01g00699 372 ProSitePatterns ATP synthase gamma subunit signature. 354 367 IPR023632 -
Aip01g00699 372 Gene3D ATP synthase, gamma subunit, helix hairpin domain 270 368 - -
Aip01g00699 372 Gene3D ATP synthase, gamma subunit, helix hairpin domain 48 110 - -
Aip01g00699 372 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 44 368 - -
Aip01g00699 372 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 49 368 IPR035968 GO:0015986|GO:0045261|GO:0046933
Aip01g00699 372 Hamap ATP synthase gamma chain [atpG]. 47 368 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aip01g00699 372 MobiDBLite consensus disorder prediction 21 43 - -
Aip01g00699 372 PRINTS ATP synthase gamma subunit signature 121 140 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aip01g00699 372 PRINTS ATP synthase gamma subunit signature 214 231 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aip01g00699 372 PRINTS ATP synthase gamma subunit signature 315 334 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aip01g00699 372 PRINTS ATP synthase gamma subunit signature 346 367 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aip01g00699 372 PANTHER ATP SYNTHASE GAMMA CHAIN 44 368 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aip01g00699 372 CDD F1-ATPase_gamma 50 365 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00699 Aip-Chr1 11385085 11386437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00699 20 368 Primary Pumps ATPases AT1G15700 69.602 3.23e-171 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00699 K02115 - qsu:112000322 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00699 01 11385085 11386437 Aip01g00699 01 11385085 11386437 ECH