Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00697 ATGAGAAGCGAACGAAGCAAAGCGAAGAGAAGAGAAAGTAGCGTCACAGCCTTCACTAGTTCGTATTCACCGTTCGCCCACCGTTCGCCGATCGCCATTACCGCCATTCGCCGGTCACTGTTCGCTCGACTTTTTCTTCTCTTTAAACTCAACACCGATAGTACCGGAAACAATGCTTGCTATGTTGAGCAAATTGATGGCATTCCTAAGTTACAAGGTGGTGTCTCCTCTTCTAGAAAAATGGGCACCGATAATGGGAGGCTCGGATTGGAGACTGACAAAGACCAATCCTTGAAGACAAGAGACTTCTTAAGTGCTTTACTATCTAAATTCCGGAGGCACAATTTGGACAGTTTTCAAGATGTGGGCATTCACAACTTCCCTGAGGATATCTTGAGAGGCAGTAGAAAATTTCAGAGTATTTGTAAGATTGGAACGGGATTTACTGAAGACGTGCTCGAACCGCGTTCTAAAAGTCTTGGTTCTCAAGTGATTCCAGAGCCAAAGTTATACTATCGATATGGAGATACAATGAAGCCTGATGTCTGGCTTGAAGCTAGTGAGGTGTAG 570 0.4474 MRSERSKAKRRESSVTAFTSSYSPFAHRSPIAITAIRRSLFARLFLLFKLNTDSTGNNACYVEQIDGIPKLQGGVSSSRKMGTDNGRLGLETDKDQSLKTRDFLSALLSKFRRHNLDSFQDVGIHNFPEDILRGSRKFQSICKIGTGFTEDVLEPRSKSLGSQVIPEPKLYYRYGDTMKPDVWLEASEV 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00697 189 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 136 189 - -
Aip01g00697 189 SUPERFAMILY Nucleic acid-binding proteins 135 189 IPR012340 -
Aip01g00697 189 Gene3D - 92 189 IPR012340 -
Aip01g00697 189 PANTHER DNA LIGASE 1 136 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00697 Aip-Chr1 11351690 11354605 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00697 137 189 Core DNA Replication Machinery Family AT1G08130 64.151 1.70e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00697 K10747 - aip:107642653 98.2117