Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00696 ATGGTTGCTGCTACCACTCCTATAGTTGGGTCCCATGCTTGGGTTGAGGATTCTGAAGTAGCATGGATAGATAGTGAAGTCTTGGAGGTTAATGGAGAAGAAGTTAAAGTCTCTTGCACTTCAGGGAAGACGGGGATAGTTGAGGAGAGAATGGAGGTGGTGCAAGCGCGTAAACAACGAATGATTTCTGGTGCCCTGATTGATCAAGAGGTTCGAACTGCACGGATAGAGGAGCTGAAGATGCATTGTTAG 252 0.4683 MVAATTPIVGSHAWVEDSEVAWIDSEVLEVNGEEVKVSCTSGKTGIVEERMEVVQARKQRMISGALIDQEVRTARIEELKMHC 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00696 83 Pfam Myosin N-terminal SH3-like domain 10 48 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aip01g00696 83 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aip01g00696 83 SUPERFAMILY Myosin S1 fragment, N-terminal domain 12 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00696 Aip-Chr1 11350674 11351604 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00696 45 81 RAD5 or RAD16-like Gene Family AT5G22750 89.189 1.85e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00696 - - gmx:100786893 77.4109