Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00692 ATGGAAAACATGAATAAGGATGCAGAGAATGATGCAAACAGTTTCACTGCAATGGGGAAATGTGTGGGAGATGGTGGCAATAATAGCGGTGGCGAAGATGGTGGTGGGGCGACAGCGACAGGTGAGGTGGCTTTGAAAAAGGGTCCTTGGACGACAATAGAAGATGCAATTTTAGTTGATTACGTGACGAAGCACGGTGAAGGGAATTGGAATGCAGTGCAAAGGAACACAGGGTTGGCTCGATGTGGAAAAAGTTGTAGGCTCAGATGGACAAACCATTTGAGACCAAATCTGAAGAAAGGTGCTTTCTCACCTGAAGAAGAAAAGCTCATCATTGAATTCCATTCTCAGTTTGGCAACAAATGGGCTCGAATGGCTGCTTTGTTACCTGGAAGAACTGACAACGAAATAAAGAATTATTGGAACACAAGGGTGAAGCGGAGGCAAAGGCAAGGGCTTCCTCTGTACTCAGATGACCCTGATCGTCCGACTATATCAAGCACACCCACGACCCCTATAACTCATCTAGGAACAAACTTCATGAACAATTCTCCCACAAGCAAGTTTGAGTTTCTCCACCACCAAAGTTATCTTCATTCTCCATCTCCACATCACCACCACCTGAACCATTCTCCTTTAACATCACCACTTCACAGAGCTCCGTCTTATTCCCCTCACACATTCTTGGATGCTACTACGCATTCCCCTTTATCCTCGTCATCACTTCACTCACCACTCTCCACTCCCATTTCATCTTCACCTCTCTCCTTCACCTTCCATAGACCTGCACCGTTGTTGTGCAACCCTCTTCGCTTTAAGCGTTACCGTTCAACTTCAACTGTGAATCCAACCACACCAACCACGCCAACCCACTTATCTGATCTTGATAACGGGTTTAGATTTCCAGTTCATCTCAACTCTTCTTCTTCTTTCTCCCACTTCTTTCAGAACCCATCCTTGTTGGATCCTGAAAGAAACATGGTATGTTCGACTTCTCCTTCTAGTTTCCTAAGCAAGATAGAGCTCCCTTCAAACCAATTTTCATTGTCATCGCAACCGCACCAAATAGAGCCATCAGAGTTTAAACTTGATGATGTTGAGTATAATAATGACCCTAACTGTTTAAATACAAGTAATGGGTTGGTTGGGGATATTCTATCTGAAGCTCAAACCATGGCTTCTAGCCATCAGAATTTAAAAAAGCGAAGCTACTTCGGCTTGAATGAAGGGCACGATGAAGTTTTTGAGGGTTGCCAAAGCTTTGATGACTCTCTTTATTGGTCTTCTAGTTCAGGACTAAAACCAAAGGAAGAAGCAACAAACTTAGACAAATCCATGAATGAGGACTTGTCAACATTGCTCCCTGTAATGCCTTCAACCTTACAATGCCAACAGAATTGGCAGCATAATAATACAACAGAAGTCTCAAATAATGTCCAATCTTCTTGTCTTATGACAGATGACAATTTTGGACTTGATATAAAGCCTGTAGCTTCATTATTTCCTCTCAACAATGCCACGAACCATGATAATAATAATAATAACACAGGATGTTACTCATGGGACAATTTATCTGGGCTATGTTGA 1587 0.4266 MENMNKDAENDANSFTAMGKCVGDGGNNSGGEDGGGATATGEVALKKGPWTTIEDAILVDYVTKHGEGNWNAVQRNTGLARCGKSCRLRWTNHLRPNLKKGAFSPEEEKLIIEFHSQFGNKWARMAALLPGRTDNEIKNYWNTRVKRRQRQGLPLYSDDPDRPTISSTPTTPITHLGTNFMNNSPTSKFEFLHHQSYLHSPSPHHHHLNHSPLTSPLHRAPSYSPHTFLDATTHSPLSSSSLHSPLSTPISSSPLSFTFHRPAPLLCNPLRFKRYRSTSTVNPTTPTTPTHLSDLDNGFRFPVHLNSSSSFSHFFQNPSLLDPERNMVCSTSPSSFLSKIELPSNQFSLSSQPHQIEPSEFKLDDVEYNNDPNCLNTSNGLVGDILSEAQTMASSHQNLKKRSYFGLNEGHDEVFEGCQSFDDSLYWSSSSGLKPKEEATNLDKSMNEDLSTLLPVMPSTLQCQQNWQHNNTTEVSNNVQSSCLMTDDNFGLDIKPVASLFPLNNATNHDNNNNNTGCYSWDNLSGLC 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00692 528 MobiDBLite consensus disorder prediction 151 176 - -
Aip01g00692 528 SMART sant 99 147 IPR001005 -
Aip01g00692 528 SMART sant 46 96 IPR001005 -
Aip01g00692 528 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 27 523 - -
Aip01g00692 528 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 27 523 - -
Aip01g00692 528 Gene3D - 46 99 - -
Aip01g00692 528 MobiDBLite consensus disorder prediction 161 176 - -
Aip01g00692 528 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 149 IPR017930 -
Aip01g00692 528 ProSiteProfiles Myb-like domain profile. 95 145 IPR001005 -
Aip01g00692 528 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 94 IPR017930 -
Aip01g00692 528 MobiDBLite consensus disorder prediction 200 219 - -
Aip01g00692 528 ProSiteProfiles Myb-like domain profile. 42 94 IPR001005 -
Aip01g00692 528 CDD SANT 49 94 IPR001005 -
Aip01g00692 528 Gene3D - 102 148 - -
Aip01g00692 528 SUPERFAMILY Homeodomain-like 45 141 IPR009057 -
Aip01g00692 528 CDD SANT 102 143 IPR001005 -
Aip01g00692 528 Pfam Myb-like DNA-binding domain 100 143 IPR001005 -
Aip01g00692 528 Pfam Myb-like DNA-binding domain 47 94 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00692 Aip-Chr1 11213634 11252016 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00692 34 156 MYB Transcription Factor Family AT4G26930 75.397 1.05e-64 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aip01g00692 Myb_DNA-binding 3.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00692 - K09422 ahf:112720267 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00692 01 11213634 11252016 Aip01g00692 01 11213634 11252016 ECH