Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00685 ATGTTCTCGTCTCTTTGGAAGGAAAAGAAAGAAGAATCTTCGAGAACAATGGAGATGCTGTTGACGTTGGTTCTATTCTGCATTCTTCTTCAGCCCGCAAGGGTTTCTTCAACTGCTCAAGGCATTGATCAAGGTTATATAGATTCAAATGCTGGAAGAACTCTGCAGCAGGAACAGGATGGTAATCATCAAATATATTGCTCTAGAGAAAGAAGCAGAGCAGCACAGAAGATCATTCAGGAGTATTTGATGCCGTTCGTGGAGAAAGAAAAATATCATATCTCAAGAAGTTGTAAGCTTCACCCTGACAATGATCTATACAGAGATCAGGAACAACATAAATCCCACATTAACATAAATGAATGGCAATGTGGTTACTGTAAGAAAATTTTCTATGAAGAGAAATATCTTGACCAACATTTTGATAACAGACACTCCAATTTGCTAAATTTGAATCAGAGCCAGTGCTTAGCAGATCTATGTGGTGCATTGCATTGTGACATTGAAATCAATTCTGGGTTGAAAAAATCAAAATGTAATCCTGCTGCTGCTGCAAGAAATAAACATCTGTGCGAGAGCTTAGCAGATAGTTGTTTTCCTGTTAATGACGGTCCTGCAGCAAGCCGACTCCATGAGGGATGA 642 0.391 MFSSLWKEKKEESSRTMEMLLTLVLFCILLQPARVSSTAQGIDQGYIDSNAGRTLQQEQDGNHQIYCSRERSRAAQKIIQEYLMPFVEKEKYHISRSCKLHPDNDLYRDQEQHKSHININEWQCGYCKKIFYEEKYLDQHFDNRHSNLLNLNQSQCLADLCGALHCDIEINSGLKKSKCNPAAAARNKHLCESLADSCFPVNDGPAASRLHEG 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00685 213 PANTHER ZINC FINGER PROTEIN-RELATED 22 212 - -
Aip01g00685 213 ProSitePatterns Zinc finger C2H2 type domain signature. 124 145 IPR013087 -
Aip01g00685 213 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 22 212 - -
Aip01g00685 213 SUPERFAMILY Expressed protein At2g23090/F21P24.15 111 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00685 Aip-Chr1 11022995 11027097 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00685 40 212 C2H2 Transcription Factor Family AT5G63280 60.571 6.07e-80 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00685 - - lang:109338698 301.982