Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00674 atggcGGAGCTCGGCCACAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCTGCCAGGCTGAGCCCTCAATCATTGCCGCCACCGGAACCGGAACCACTCCCTCCAGCTTCTCCTCCGTTTCCGTCTCCATACGCGGTGGAGCTGGCTCTCTCTCTTCTCCTTCCTCAACCTCTGCAGCGTCTTCGCTCGACCACAAGCCCTTGCTCGCTCCCACTCCCTTCATACTCGGCAAGCGCATACGCACCGACGACGACGCTTCCGCCAAGGACGACGGGGTCTCCGTGGGACCCGCCGTGGGGTCTTCAGTGGGCCCCGGAGCTCCAGCAAGGCTCTGGGCCCTCCCGGCCAGGCCCGATTTCGGTCAAATTTAG 372 0.6344 MAELGHKSDGQTIEWLLCQAEPSIIAATGTGTTPSSFSSVSVSIRGGAGSLSSPSSTSAASSLDHKPLLAPTPFILGKRIRTDDDASAKDDGVSVGPAVGSSVGPGAPARLWALPARPDFGQI 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00674 123 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 3 123 - -
Aip01g00674 123 MobiDBLite consensus disorder prediction 82 110 - -
Aip01g00674 123 MobiDBLite consensus disorder prediction 46 63 - -
Aip01g00674 123 ProSiteProfiles TCP domain profile. 1 27 IPR017887 -
Aip01g00674 123 MobiDBLite consensus disorder prediction 46 65 - -
Aip01g00674 123 Pfam TCP family transcription factor 3 61 IPR017887 -
Aip01g00674 123 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 3 123 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00674 Aip-Chr1 10881765 10882136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00674 3 123 TCP Transcription Factor Family AT5G23280 60.484 1.69e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip01g00674 TCP 2.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00674 K16221 - aip:107646651 134.806