Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00670 ATGACAAATTTGCCCCCGTCATTATCAATGAACGCAGCCTTTGGCGGCAGCGGTGCTGCTCCTCCGCCTTCTCCCGGTGGCTCCTCCCAGAGCTCCCCCGGAGGCACCAAGGATCGTAAGATGGCCTCCGCCGAGCAGCTTGTCCTCGAGCTCAGCAACCCCGACCTCCGTGAAAACGCTCTACTCGAACTCTCCAAGAAGAGAGAATTATTTCAAGATCTTGCTCCATTATTATGGAATTCATTTGGTACTATTGCTGCACTTTTGCAGGAAATAGTTTCAATATACCCTGTTCTTTCTCCACCAAATCTTACTCCAGCACAATCTAATCGTGTGTGCAATGCACTTGCTCTTCTTCAGTGTGTGGCATCACACCCTGATACAAGGATGTTGTTCCTCAATGCTCATATACCTCTATATCTGTATCCCTTCCTTAATACAACAAGCAAATCAAGACCATTCGAGTACTTGAGACTCACCAGTCTTGGCGTCATTGGTGCTTTGGTGAAGGTTGATGATACGGAAGTCATAAGTTTCCTTCTTTCAACTGAGATAATTCCATTGTGCCTGCGCACCATGGAAATGGGCAGTGAACTATCAAAAACAGTTGCAACTTTCATTGTTCAGAAAATCCTATTGGACGACGTGGGCTTGGATTATATTTGCACTACAGCAGAGCGTTTTTTTGCAGTAGGTCGAGTTTTGGGAAACATGGTGGCAGCTCTTGCTGAGCAGCCTTCATCTCGTTTGTTGAAGCATATCATCCGATGCTATCTTCGCCTATCAGATAATCCAAGGGCTTGTGATGCATTAAGAAGTTGTCTTCCAGACATGTTAAGAGATGCTACTTTCAGCAACTGCCTTCGTGAGGACCTTACAACCAGGAGGTGGCTGCAACAATTGCTTCAGAATGTTGGTGTGAGTCGGGTGCCCACTCTGCAAGCCGGAGGCGGCTTCGACCATATGATGGTGACATGA 978 0.4693 MTNLPPSLSMNAAFGGSGAAPPPSPGGSSQSSPGGTKDRKMASAEQLVLELSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSNCLREDLTTRRWLQQLLQNVGVSRVPTLQAGGGFDHMMVT 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00670 325 PANTHER BNAA05G20110D PROTEIN 1 323 - -
Aip01g00670 325 MobiDBLite consensus disorder prediction 23 37 - -
Aip01g00670 325 Pfam Cell differentiation family, Rcd1-like 47 305 - -
Aip01g00670 325 SUPERFAMILY ARM repeat 49 276 IPR016024 -
Aip01g00670 325 MobiDBLite consensus disorder prediction 1 43 - -
Aip01g00670 325 PANTHER UNCHARACTERIZED 1 323 - -
Aip01g00670 325 Gene3D - 35 306 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00670 Aip-Chr1 10745054 10752062 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Aip01g00670 Rcd1 2.8e-129 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00670 K12606 - gmx:100784529 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00670 01 10745054 10752062 Aip07g00288 07 2649407 2652793 PCT