Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00640 ATGTCACTTGAATTTGGACTTCAAAATCTTTGTAGTCACCGGGAATGGAAGCCACTGGGAGAGAGAGGCCGTTGTTTGGGCCTAGGAAGGCCCAGGCCCAGTTTCTCTGAATCAGAGGAATGTCGACGCGTTTCAGTATATGCGAAATGTGACGAAGCAGCGGGCACCATGAGATCTCTACACTGTCATCACCAAGCTTCACAAACCTCCGAGGAATCCATTTTCTCTGATCAGGATCCAATTTGCTGCAACAGAGGGCCTTCCACTAATATCTTTCACCTAACTTTGGTCATTACTGCAACAATATGCTGCTGGATGATGTGGGCGATTGTATATCTCGCGCAGATGAAACCGCTCATAGTACCAATACTGAATGAGGGCGAATAA 387 0.4703 MSLEFGLQNLCSHREWKPLGERGRCLGLGRPRPSFSESEECRRVSVYAKCDEAAGTMRSLHCHHQASQTSEESIFSDQDPICCNRGPSTNIFHLTLVITATICCWMMWAIVYLAQMKPLIVPILNEGE 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00640 128 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 81 128 - -
Aip01g00640 128 Pfam ATP synthase subunit H 81 125 IPR008389 GO:0033179|GO:0046961|GO:1902600
Aip01g00640 128 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 81 128 IPR008389 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00640 Aip-Chr1 9903858 9906919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00640 81 128 Primary Pumps ATPases(2) AT5G55290 85.417 2.29e-26 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00640 K02153 - aip:107622172 144.821