Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00638 ATGGCGTCTTCGGATGATGAGCCAGAGTCTCAGCCACTATCTGTCTCGAATTACCACTTTGAAGATGACAGGGATGCCCCTGTATCGTTTTCTGTGATGCCAATTCAATGGAGTGGGTCGGAGAGTCCTCAAGGCAAGAAAACAGAGTTGTTCCTCCACGGTGTGGCGGATAATGGGCTGCAGAAGATTATGATGCCGGTCATGGCGTGGCGGTTCGAGCTTTCCTCTGTGAAGCCTGAGATATCTGTGCTGTCATCCAAGGATAGGAGATGGATCAAACTTGAGAAGCCAAGAAAGAGCTATGAGGACATTGTAAGGGGTATTTTAGTAACTGTTTACTTCCTGAGTTTTGCAAAGAAGAATCCTGATGCAACCGCGAAAGCTGCGTGGGATAGCTTGAGTAAGAATAAGGAGTTTAGCTCTTACGAGGTTATGCCTTCGGCAAATGATTTAGTAAATCAGAAGGCTTTGATGAGTGAAGCAGCCAAGAGGGATGCTTTGTTGGCTAAGTCCAAGCTTTTACCCATGGCTCTGGAGGGTAACCTGGGGGCTAAGAAACTTTTTGATGAGGAGCTAAAAGATTTGGCACGGCCTGGATTTATAATTGATGATGATGTTGATGATGACATGACTGATGTAAATGATGAAGAGTCAGATGAAGAAGATGAATTGTTTGATTCTCTTTGTTCTATTTGTGACGATGGTGGTAATCTTTTGTGCTGTGATGGAAAGTGCATGAGATCATTTCATGCTAATAAGGAGGATGGCGTCAACTCTTCTTGTGTCTCTCTTGGTTTTAGCCAGAAGGAAGTTGAAGACATCCCAAATTTTTATTGCAAGAATTGTGAACATAATCAGCATCAGTGCTTTGCATGTGGCAAACTAGGCTGTTCCGATAAATTCTCTGGTGCTGAGGTCTTCCAATGTGCCTCTGCAACCTGCGGCTACTTTTATCATCCTCAATGTGTTGTGAAGTTACTTCATCGATTTAATGAGAATGCTTCAAGGGAACTTGAGACAAATATTAGTCGGGGAGAACCTTTTACTTGTCCATCCCATTACTGCTATGTTTGTAAAGAAACGGAGAACAAAAAGGAACATGAGTTGCAGCTTGCTGTTTGTAGGCGTTGTCCCAAGTCATATCATCGCAAATGTTTGCCAAGAGCAATTGCTTTTGAAGACATAGAAGATGAGGGTATAATAACGAGGGCCTGGGACAATCTAATACCCAATCGTGTTCTTATATATTGCTTAAAACATGATATCGATAAAGATCTTGGGACTCCTAAACGAGATCACATAAAATTCCCCAATGATAAATCTAATGTTCAAGAAGCAAGTACAGAGCAGAAGAGAAAACCTGCAACTGAAGAGAGAGTTATGTTGAAGAATAATGTTAACCTGGATAATTCAGTCAACAAAAGAAGCATTGCTGATGTACCTAAACTGTCTACTAAAGTACCTAAACTTGCTGGAAAAAAGTCTTCTGGACCAGTTGGTATCAAGAAGTTTAATAAGGTTTCAGGATCAAATATCCAAAGGAAACCAATAGATATTGAATCATCTAGAAAACGTTTGTGTGAAAGTAAGAGACCATTCTCAAAGGAAACTGAAAGGCCTGATTGTGAGGAAAATGAGCCCTCAATTGGTGTGCAATTATATGCAATCTGGGAGAAGGGTTCTGGACAAACTGGCTTGGGCAATCAGGTTGATAACAAAGCCAGTGCCCAATCTGTTATGCCTACTAGAAAACCAAGCAGCCCATTATGTACATTAGATGCTGATTCGAAGAGGAGACTGTTGGATCTGTTTAATGAAGCTACATCATCAGTTACTCTTAAGGATGTTGTAAAAGAACATAAATTTGCTTCTCATTCTCACTCATTGAAAAATTTTATGGAGAAGACTACAGTTGGGAAGTTGGAGCGCTCTGTTGAGGCTGTTCGAACAGCTTTAAAGATGCTAGAGGATGGGCGCAGCATTCGTGATGCAGAAGCTGTTTGTGGCCCTGATGTTCTTAACCAGATATATAAGTGGAAGGACAAGTTGAAAGTATATCTAGCACCTGTTCTGTATGGTAACCGCTATACGTCATTTGGTCGCCATTTTACACAAGTGGAAAAGCTAGAAGGGATTGTTGATAGACTCCACTGGTATGTTCAGAATGGTGATACGATTGTGGACTTCTGTTGTGGTGCTAACGACTTTAGCATACTTATGAAAAAAAAGCTTGAAGAAACTGGGAAGAGATGCTCATATAAGAACTATGATTTACTTCCAACAAAGCACGATTTTTGTTTTGAGATGAGAGATTGGATGACTGTCCAGCCAAAGGAGTTGCCTACAGGGTCACAGTTGATCATGGGTCTTAATCCGCCCTTTGGGCTAAAAGCAGCTTTGGCTAACAAGTTTATAGATAAGGCTCTTGAGTTTAGACCAAAGCTCCTCATTCTTATAGTTCCACCGGAAACAGAGAGGCTAGACAAAAAAAGGTCACGTTATGATCTTGTCTGGGAGGATCGAAATTTTCTATCAGGAAAGTCATTTTATCTACCTGGATCAATTAATACTAGTGACAGACAAATGGAACAATGGAATCTGACATCTCCCCCACTCTCCCTTTGGAGTCGACCTGACTGGACTGATAAGCATATGGAAGTAGCCCAAAAGCACGGTCATCTGTTAAGCCTGCATGAAGTATCACGGATGGAAAGTTTTAATAATCAAAATTCACGTGCTAGCCATTCTATGGATGGTAATTTTGCCGACGACGATATGCTGGTTGATGATCTGTTGGTGTCAACTGATGATCTTGAAGTTCAGGGGCTTATTAATGACGATCAGCAAGAAATATCAATGGTTGGAAATGTTGAACGAGAGAGTCAAGAGAGACATGAATCTTGGACGGAAAGGACTCCAAATGAAAATGTTGGATGTGAGAGTCAAGAGAGACATGATTATCTAATGCGAAAGACTCCACATGGAAATGTTGAATGCGAGAGTCAAGAGCGACATGATTACAGGATGGGAAAGACTCCTCATGGAATTGTTGAACGAGAGAGTCAAGAGCAACATGATTACAGGATGGGAAAGACTAAGACCTCATGGAACAGGAAACACACTGAGGAAAACAACAGAGGAGGTCCGCATGCGAGCTCACCTGCCAAAAGTAATGCCAAAAATCAAACTAAGGGATTACCTCACCGTAGTCAATCTAATCCGAAAGATGGGAGATCCTCAGTTGGGGGTCTTCAGCCAAAGTCTAGTGTGTCATCTGCCTATGGTTATGGTCATCTGGAACCCATGCGATTTGTAGCAGCTAGTGATTATATGGCTTCCAATTTCGAGGAGCACCATAGCAGCCTTTTGATAGATGGCACCAATACCCTAGGATATAACCCCTATGTTGGGGAGGATGACAGTTATCTGAGGGAACCAAGGCAACAACCTCGCCTTTATGGGCTTCAGGATCCAGATTCTCATTATCCGACGAGTAATTTTTTATCTGGTCATGATTCTGTGTATGGTCGTATGGGATCCGGTTATGGAGTACTTGGTTCGGGATCCGAGTCAGCTTACATGATGAGCACTCCAGCTATGCAACGGTACGCTTCGCGCTTGGATCCTAGGCTGGATTCTTTTGGATCTGTACCCCCTATGGTTGGTAGAAATGCCGGCTTTGAACACGGTGTTCCCCAACCTGAATATGGAAGTGGGACGCCGAGTGGTATGCCAGGTTTTGCACCTCAACCTCAGGATCCCTATCGCTATCCCAATTCGCGCTCGAATTCAGGAAGTTGGTTCAATGGGTAA 3813 0.4254 MASSDDEPESQPLSVSNYHFEDDRDAPVSFSVMPIQWSGSESPQGKKTELFLHGVADNGLQKIMMPVMAWRFELSSVKPEISVLSSKDRRWIKLEKPRKSYEDIVRGILVTVYFLSFAKKNPDATAKAAWDSLSKNKEFSSYEVMPSANDLVNQKALMSEAAKRDALLAKSKLLPMALEGNLGAKKLFDEELKDLARPGFIIDDDVDDDMTDVNDEESDEEDELFDSLCSICDDGGNLLCCDGKCMRSFHANKEDGVNSSCVSLGFSQKEVEDIPNFYCKNCEHNQHQCFACGKLGCSDKFSGAEVFQCASATCGYFYHPQCVVKLLHRFNENASRELETNISRGEPFTCPSHYCYVCKETENKKEHELQLAVCRRCPKSYHRKCLPRAIAFEDIEDEGIITRAWDNLIPNRVLIYCLKHDIDKDLGTPKRDHIKFPNDKSNVQEASTEQKRKPATEERVMLKNNVNLDNSVNKRSIADVPKLSTKVPKLAGKKSSGPVGIKKFNKVSGSNIQRKPIDIESSRKRLCESKRPFSKETERPDCEENEPSIGVQLYAIWEKGSGQTGLGNQVDNKASAQSVMPTRKPSSPLCTLDADSKRRLLDLFNEATSSVTLKDVVKEHKFASHSHSLKNFMEKTTVGKLERSVEAVRTALKMLEDGRSIRDAEAVCGPDVLNQIYKWKDKLKVYLAPVLYGNRYTSFGRHFTQVEKLEGIVDRLHWYVQNGDTIVDFCCGANDFSILMKKKLEETGKRCSYKNYDLLPTKHDFCFEMRDWMTVQPKELPTGSQLIMGLNPPFGLKAALANKFIDKALEFRPKLLILIVPPETERLDKKRSRYDLVWEDRNFLSGKSFYLPGSINTSDRQMEQWNLTSPPLSLWSRPDWTDKHMEVAQKHGHLLSLHEVSRMESFNNQNSRASHSMDGNFADDDMLVDDLLVSTDDLEVQGLINDDQQEISMVGNVERESQERHESWTERTPNENVGCESQERHDYLMRKTPHGNVECESQERHDYRMGKTPHGIVERESQEQHDYRMGKTKTSWNRKHTEENNRGGPHASSPAKSNAKNQTKGLPHRSQSNPKDGRSSVGGLQPKSSVSSAYGYGHLEPMRFVAASDYMASNFEEHHSSLLIDGTNTLGYNPYVGEDDSYLREPRQQPRLYGLQDPDSHYPTSNFLSGHDSVYGRMGSGYGVLGSGSESAYMMSTPAMQRYASRLDPRLDSFGSVPPMVGRNAGFEHGVPQPEYGSGTPSGMPGFAPQPQDPYRYPNSRSNSGSWFNG 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00638 1270 MobiDBLite consensus disorder prediction 959 1087 - -
Aip01g00638 1270 MobiDBLite consensus disorder prediction 1 20 - -
Aip01g00638 1270 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 285 376 IPR013083 -
Aip01g00638 1270 SMART PHD_3 355 421 IPR001965 -
Aip01g00638 1270 SMART PHD_3 288 354 IPR001965 -
Aip01g00638 1270 SMART PHD_3 228 283 IPR001965 -
Aip01g00638 1270 SUPERFAMILY FYVE/PHD zinc finger 341 391 IPR011011 -
Aip01g00638 1270 MobiDBLite consensus disorder prediction 1255 1270 - -
Aip01g00638 1270 MobiDBLite consensus disorder prediction 1226 1270 - -
Aip01g00638 1270 CDD PHD3_NSD 354 420 - -
Aip01g00638 1270 Pfam Cytosine specific DNA methyltransferase replication foci domain 14 113 IPR022702 -
Aip01g00638 1270 CDD PHD2_NSD 288 353 - -
Aip01g00638 1270 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 225 284 IPR013083 -
Aip01g00638 1270 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 1005 1256 - -
Aip01g00638 1270 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 1 969 - -
Aip01g00638 1270 PANTHER ENHANCED DOWNY MILDEW PROTEIN 1005 1256 - -
Aip01g00638 1270 PANTHER ENHANCED DOWNY MILDEW PROTEIN 1 969 - -
Aip01g00638 1270 MobiDBLite consensus disorder prediction 959 1046 - -
Aip01g00638 1270 MobiDBLite consensus disorder prediction 1 17 - -
Aip01g00638 1270 MobiDBLite consensus disorder prediction 1047 1087 - -
Aip01g00638 1270 MobiDBLite consensus disorder prediction 436 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00638 Aip-Chr1 9883101 9897560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00638 217 329 PHD Transcription Factor Family AT3G14980 29.204 6.62e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00638 - - aip:107622338 2042.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00638 01 9883101 9897560 Aip01g00638 01 9883101 9897560 ECH
Aip01g00638 01 9883101 9897560 Aip07g00240 07 2056357 2061169 PCT