Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00625 ATGGAGCCTTCGCGAGTCCCAGCTACAACTCTCTTCTCCTCCTCCTCGATCCTTCTCACGCAGGAGCAGTTTGCGAAACTTCTGATAAAACTGCTAATGCCAACGAGCTTCACCAACATCCAAGGAATCGCACTCAAGACAATCCCATCCGCCACCAAGATCAAGATCAAGCACATCCTTGAGTCCCTCTATGGCTTCCTAGTCGAGAGGGTTCAAACCCTAAACATGAAAGGGAAGAAGAAGAAGCGTGGTGGCATCCTCTTTGCAAAACCCGATTACAAGAAGGCTTACGTCACTCTCAAGACCCCTCTTTCAATCGACATGAATCTTTTTTCGCTAAAAATGGTTGAAGATGCCAGGAAGCGGATGAACAAGAAGAACGTGTCAAGCGTCGTTGAGGACGAAGAAGAGGAAGAGCTGCTGAGGGAGAAAACTCGCGAGAATGTTGTGAAGCTTTTAAAAGTACACATCAATCACACGAACATGTCTCTGTATCTTGCTTTTGATTACGCCGGGCACGACCTTTATGTGAGTTTTATTCTAGAACATGCCCTTGTGGTGCTTACTTGA 570 0.4649 MEPSRVPATTLFSSSSILLTQEQFAKLLIKLLMPTSFTNIQGIALKTIPSATKIKIKHILESLYGFLVERVQTLNMKGKKKKRGGILFAKPDYKKAYVTLKTPLSIDMNLFSLKMVEDARKRMNKKNVSSVVEDEEEEELLREKTRENVVKLLKVHINHTNMSLYLAFDYAGHDLYVSFILEHALVVLT 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00625 189 PANTHER BNAC07G51330D PROTEIN 24 138 - -
Aip01g00625 189 Gene3D - 19 155 IPR012677 -
Aip01g00625 189 Pfam Ribosomal protein L23 43 106 IPR013025 GO:0003735|GO:0005840|GO:0006412
Aip01g00625 189 PANTHER RIBOSOMAL PROTEIN L23-RELATED 24 138 IPR013025 GO:0003735|GO:0005840|GO:0006412
Aip01g00625 189 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 46 108 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00625 Aip-Chr1 9541008 9542207 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00625 140 176 Core Cell Cycle Gene Families AT5G63610 72.973 8.87e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00625 K02892 - pop:7476080 152.91