Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00620 ATGATAAATAATTTGTTGGTTAATTTTGCTCATGAACACAAGAAAGTGGTCCCAATATCACTGTTTGTTGCTGTTCTGTGCCTTTGCTTGGTCATTGGTCACTTGCTTGAAGAAAATCGATGGGTTAATGAGTCCATTGTAGCCATTTTACTTGGATGCATAGCTGGAAGCATACTCTTATTAGTCACCAAAGGAAAAAGTTCCCACATTCTTACCTTTGATGAAGAACTCTTCTTTATATATCTCCTTCCTCCCATAATCTTCAATGCTGGATTCCAGGTGAAAAAGAAACAATTCTTCCATAACTTCTTAACCATCATGATGTTTGGAGTGATTGGTGTTTTTATTTCGACTTCTATTATTACGGGCGGCAGTTGGTGGCTGTTTCCTAAGTTGAACTTCCTCGGCTTGAGTGCGCGGGATTACCTCGCTATAGGAACAATTTTCTCATCAACAGACACAGTTTGTACACTGCAGGTGCTGCATCAAGATGAAACTCCTTTACTATACAGCCTAGTGTTTGGGGAAGGAGTGGTAAATGATGCAACATCAGTTGTTCTCTTCAATGCTGTTCAAAAGCTTGATGTTTCCAGACTCAGTGGCAGGGCATTCCGCGTTCTCGGAGATTTCTTGTATCTCTTCTCATCAAGCACTGCTCTTGGAGTATTAACCGGACTTCTCACAGCATATATCTTGAAAGGCTTAAGTTTTGGAAGACATTCAAGTGTTCGCGAAATTTCATTGATGATGTTAATGGCATACCTATCTTACATGTTGGCCGAGCTACTTGAATTAAGTGGAATCCTCACTGTTTTCTTTTGTGGGATACTAATGTCACATTATGCATGGCATAACGTAACTGAAATTTCAAGAATCACAACCAGGCATGTGTTTGCGACAATATCGTTTATTGCAGAAACTTTCATATTTCTTTACGTGGGAATGGATGCACTTGACATTGAAAAGTGGAGGATGACCAAATTAAGTTCCGGAAGTTTGATGGGAATTTACGGTTGCTTAATCTTACTGATATTAGTTGGGCGTGCTGCATTCGTCTTCCCGCTCTCGGCTTTTGCCAATTCCATGATGAGTAGGCGCGCCGGGAGCGGGTCAAGTATCACATTCAAACATCAGATAATTATTTGGTGGGCTGGTCTAATGAGGGGAGCAGTCTCAATTGCTCTTGCTTTCAAACAGTTCACATTCTCTGGTGTTACCTCTGATCCCGTGAATGCAACTATGATTACCAACACCATTATTGTTGTTCTTTTCACCACATTAGTGTTTGGTTTTCTAACAAAACCACTGATTAGATATATGCTTCCCCACAACAATGGAACAAGAAGAAACACAAACCATGAAGCAGGAGGGACACCTGGTGAGGACTTGAACTTGCCTTTGTTGTCTTTTGAAGAGTCAGCAGCAACAAACATAAGCCGTGCAAAGGAAAGTCTTTCCATGTTCATAGGGTCTCCAGTATACACCATACATCACTATTGGAGAAAGTTTGATGATGCATACATGAGGCCTCTCTTTGGTGGACCTCACCATAACAGGTCGCGGTGCTAG 1569 0.4124 MINNLLVNFAHEHKKVVPISLFVAVLCLCLVIGHLLEENRWVNESIVAILLGCIAGSILLLVTKGKSSHILTFDEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMMFGVIGVFISTSIITGGSWWLFPKLNFLGLSARDYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDVSRLSGRAFRVLGDFLYLFSSSTALGVLTGLLTAYILKGLSFGRHSSVREISLMMLMAYLSYMLAELLELSGILTVFFCGILMSHYAWHNVTEISRITTRHVFATISFIAETFIFLYVGMDALDIEKWRMTKLSSGSLMGIYGCLILLILVGRAAFVFPLSAFANSMMSRRAGSGSSITFKHQIIIWWAGLMRGAVSIALAFKQFTFSGVTSDPVNATMITNTIIVVLFTTLVFGFLTKPLIRYMLPHNNGTRRNTNHEAGGTPGEDLNLPLLSFEESAATNISRAKESLSMFIGSPVYTIHHYWRKFDDAYMRPLFGGPHHNRSRC 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00620 522 Pfam Sodium/hydrogen exchanger family 23 437 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aip01g00620 522 PANTHER SODIUM/HYDROGEN EXCHANGER 8 518 IPR018422 GO:0006812|GO:0015299|GO:0016021
Aip01g00620 522 PANTHER SODIUM/HYDROGEN EXCHANGER 8 518 - -
Aip01g00620 522 Gene3D - 138 190 - -
Aip01g00620 522 PRINTS Na+/H+ exchanger signature 77 88 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aip01g00620 522 PRINTS Na+/H+ exchanger signature 91 105 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aip01g00620 522 PRINTS Na+/H+ exchanger signature 106 114 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aip01g00620 522 PRINTS Na+/H+ exchanger signature 146 156 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00620 Aip-Chr1 9410985 9417118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00620 10 522 Antiporters AT5G55470 72.447 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00620 - - gmx:100813332 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00620 01 9410985 9417118 Aip01g00620 01 9410985 9417118 ECH