Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00598 ATGCCTGGCGTTAAAGTTCATCCATCATACACAGAGTCGGAGACATTCATTGAGGTGGATCCGACGGGAAGATACGTGAGGTACCCTGAGCTTCTAGGATCAGGTTCAGTGAAGAGAGTGTACAGAGCATTTGACAAAGAAGAGGGAATAGAAGTGGCCTGGAACCAAGTGAGACTGAAGAACTTCAAGGATGACCCTGTCATGCTTCATAGGCTTCACTCCGAAATCATGTTGCTAAAAGGCTTCTCCAACGACCACATCATTTCGCTATTCGCATCCTGGAAGGATGACGTCAGCAACACTTTGAATTTCATCACGGAAGTGTGCAGCAGCGGCAGTATGAGGGAGTACAGGAAGAGGCACAAGAATGTCTCCATGAAGGCTGTCAAGAAATGGTCAAAGCAGATTCTAGAAGGTTTGAATTATTTGCACACACACGATCCCTGCATCATCCACAGAGACCTCAACTGCAGTAATGTGTTTGTCAATGGAAACACCGGCCAGGTTAAGATCGGTGACTTGGGCTTGGCGGCGGTTGTGGGGAGGAGCCACTCGGCACATTCGGTTCTGGGGACGCCGGAGTTCATGGCGCCGGAGTTGTACTCGGAGAAGTACACGGAGAAGGTGGACATATACTCGTTTGGGATGTGTGTGTTGGAGATGGTGACGAGAGAGATACCGTACAGCGAGTGTGAGAGTGTTGTGAAGATATACAAGAAGGTGACGTCAGGCGTGAGGCCGCAGTCGCTGAATAAGATTAATAATTCCGAGCTGAAGTCGTTCATTCACAAGTGCATCGCTCACCCGCCCTCTGCTAGACCTTCTGCTGCTCAGCTTCTTCGCGACCCTTTCTTTCATGACCTTCATGAGTCATGA 876 0.4943 MPGVKVHPSYTESETFIEVDPTGRYVRYPELLGSGSVKRVYRAFDKEEGIEVAWNQVRLKNFKDDPVMLHRLHSEIMLLKGFSNDHIISLFASWKDDVSNTLNFITEVCSSGSMREYRKRHKNVSMKAVKKWSKQILEGLNYLHTHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAVVGRSHSAHSVLGTPEFMAPELYSEKYTEKVDIYSFGMCVLEMVTREIPYSECESVVKIYKKVTSGVRPQSLNKINNSELKSFIHKCIAHPPSARPSAAQLLRDPFFHDLHES 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00598 291 SUPERFAMILY Protein kinase-like (PK-like) 20 285 IPR011009 -
Aip01g00598 291 Gene3D Transferase(Phosphotransferase) domain 1 109 289 - -
Aip01g00598 291 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 289 - -
Aip01g00598 291 ProSiteProfiles Protein kinase domain profile. 26 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00598 291 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g00598 291 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED 1 289 - -
Aip01g00598 291 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00598 Aip-Chr1 9008534 9009409 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00598 12 285 MAP Kinase Kinase Kinase AT5G55560 72.263 2.60e-158 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aip01g00598 Pkinase 6.2e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00598 K08867 - gmx:100782039 454.136