Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00594 ATGGAGTCAGTAGGCAAGAGTAATAGGGAAATAGTAGTTGTGGTGGTGGCGATGTTTCTTTCAGTTTGTTTAGTGTGTTATTCCGATGGCAGTGTAATCGTATCGAAAGATGGGAACGGAGATTACAAAAGTGTGAGTGAAGCAATTAAGAATGCTCCAAAGTTGAGTCAAAGTGTTTACACCATTCATGTTCGAGCTGGTACTTATGAAGAGTATGTTGTTATTCATCATGACAAGACCAATATTAAGCTTGTTGGAGATGGTCCTCGCCACACTAAATTAGTTGCTTACCAAGGTTCCACCATAGATATTCATGGAGAAGGGTTCATGGCGGAAAGCATAGCATTTGTGAACTCAGCGGGTCTAAAAGCAAGCGGAGCAGTAGCCGTACGCAACGAAGCAAACAACACCGTCTTCTACCGATGTTCCATCGACGGTTACCAGGACACTCTATGGGCAGTTTCCGGCCGGCAGTTCTACAAGAACTGCGACATCTACGGCACCGTCGACTTCATCTACGGCGCCGCCGCCGCCGTCTTCCAGGACTGCATGCTCTACGCCAGATACCGTGATCACGTGACATTCACCGCTCAGTCACGTGACGATCCAAATGACAATAACTCCGCCTTCACTTTCCAGAGATGCAACTTCACGATGTCTCCAGAAGATTCCATTTCGCATGCTAAGTCGGAGATGCATGCGACTTTGGGCCGCCCATGGAGGCCGTACTCAACGGTGGCTATACTGCAGTGCTTTATTGACTCTATTGTTGGGCCCGCGGGCTGGGAAGAGATGCCGGGGCAGCCCACTGATAGGGTTACGTATGTGGAGTATGGGAATGTTGGGCCTGGGGCTGGTACGGACGGGAGAGTGAAGTGGCCTGGTGTTAGAGTGCTTCATCGACCAGCTGAAGCACAACGTTTCACTGCTTCCAATCTCTTGGATGCTGACTCTTGGATTCCATCCACTGGTGTTCCTTATGACAATGGATTCTAG 996 0.492 MESVGKSNREIVVVVVAMFLSVCLVCYSDGSVIVSKDGNGDYKSVSEAIKNAPKLSQSVYTIHVRAGTYEEYVVIHHDKTNIKLVGDGPRHTKLVAYQGSTIDIHGEGFMAESIAFVNSAGLKASGAVAVRNEANNTVFYRCSIDGYQDTLWAVSGRQFYKNCDIYGTVDFIYGAAAAVFQDCMLYARYRDHVTFTAQSRDDPNDNNSAFTFQRCNFTMSPEDSISHAKSEMHATLGRPWRPYSTVAILQCFIDSIVGPAGWEEMPGQPTDRVTYVEYGNVGPGAGTDGRVKWPGVRVLHRPAEAQRFTASNLLDADSWIPSTGVPYDNGF 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00594 331 Pfam Pectinesterase 32 316 IPR000070 GO:0030599|GO:0042545
Aip01g00594 331 SUPERFAMILY Pectin lyase-like 28 329 IPR011050 -
Aip01g00594 331 PANTHER PECTINESTERASE 12 330 - -
Aip01g00594 331 Gene3D - 30 331 IPR012334 -
Aip01g00594 331 PANTHER PECTINESTERASE 12 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00594 Aip-Chr1 8910892 8915795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g00594 34 331 Carbohydrate Esterase AT4G02300 40.064 1.49e-77 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00594 K01051 - gmx:102665195 426.787